C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000415679 RP11-226L15.1-001 ENSG00000237409 9606 + 1:160020300-160020727 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000415679
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000415679 0.440±0.00 0.725±0.00 0.139±0.00 0.401±0.00 0.598±0.19 0.434±0.16 0.389±0.00 0.419±0.07 0.780±0.00 1.179±0.00 0.106±0.00 0.270±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000077389 Gm7536-201 protein_coding Mus_musculus 0 390
ENSMUST00000143107 Rpl27a-001 protein_coding Mus_musculus 0 390
ENSMUST00000084017 Gm5908-201 processed_pseudogene Mus_musculus 0 381
ENSMUST00000170338 RP23-323H18.3-001 processed_pseudogene Mus_musculus 0 368
ENSMUST00000184561 Gm19353-001 processed_pseudogene Mus_musculus 0 361
ENSMUST00000053298 Rpl27a-005 retained_intron Mus_musculus 0 361
ENSMUST00000118191 Gm8213-001 processed_pseudogene Mus_musculus 0 350
ENSMUST00000117531 Gm14044-001 processed_pseudogene Mus_musculus 0 346
ENSMUST00000122416 Gm15727-001 processed_pseudogene Mus_musculus 0 333
ENSMUST00000122320 Gm14439-001 processed_pseudogene Mus_musculus 0 329
ENSMUST00000121260 Gm14407-001 processed_pseudogene Mus_musculus 0 329
ENSMUST00000117666 Gm12218-001 processed_pseudogene Mus_musculus 0 268

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