C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted pseudogene 8213
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118191 Gm8213-001 ENSMUSG00000082474 10090 - 6:116195418-116195858 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000118191
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000118191 0.252±0.03 0.429±0.15 0.211±0.13 0.535±0.45 0.507±0.39 0.113±0.00 0.211±0.15 0.424±0.51 1.240±0.52 0.261±0.14 0.373±0.34 0.428±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00081B CIL_00081B_0002 VISTA 6:116052182-116663911

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000314138 RPL27A-001 protein_coding Homo_sapiens 0 518
ENST00000358609 RPL27AP-001 processed_pseudogene Homo_sapiens 0 368
ENST00000415679 RP11-226L15.1-001 processed_pseudogene Homo_sapiens 0 350
ENST00000424277 RPL27AP8-001 processed_pseudogene Homo_sapiens 0 340
ENST00000448912 AC104076.2-001 processed_pseudogene Homo_sapiens 0 351
ENST00000469428 RPL27AP5-001 processed_pseudogene Homo_sapiens 0 429
ENST00000492974 RP11-475C16.1-001 processed_pseudogene Homo_sapiens 0 501
ENST00000524496 RPL27A-007 protein_coding Homo_sapiens 0 468
ENST00000525981 RPL27A-010 protein_coding Homo_sapiens 0 193
ENST00000526562 RPL27A-009 protein_coding Homo_sapiens 0 396
ENST00000530022 RPL27A-008 protein_coding Homo_sapiens 0 514
ENST00000530913 RPL27A-011 protein_coding Homo_sapiens 0 396
ENST00000532359 RPL27A-006 protein_coding Homo_sapiens 0 257
ENST00000534599 RPL27A-005 nonsense_mediated_decay Homo_sapiens 0 468

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