C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 14439
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000122320 Gm14439-001 ENSMUSG00000084050 10090 + 2:175062436-175062876 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000122320
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000122320 2.051±0.70 2.405±0.54 0.668±0.27 0.554±0.36 2.015±0.91 0.677±0.56 0.176±0.12 1.046±0.33 0.279±0.24 0.954±0.27 0.192±0.05 0.825±0.42 0.322±0.16 0.218±0.07

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00093L CIL_00093L_0002 VISTA 2:174556549-175160580

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000314138 RPL27A-001 protein_coding Homo_sapiens 0 494
ENST00000358609 RPL27AP-001 processed_pseudogene Homo_sapiens 0 340
ENST00000415679 RP11-226L15.1-001 processed_pseudogene Homo_sapiens 0 329
ENST00000424277 RPL27AP8-001 processed_pseudogene Homo_sapiens 0 329
ENST00000439114 AC114755.4-001 processed_pseudogene Homo_sapiens 0 231
ENST00000448912 AC104076.2-001 processed_pseudogene Homo_sapiens 0 318
ENST00000469428 RPL27AP5-001 processed_pseudogene Homo_sapiens 0 396
ENST00000492974 RP11-475C16.1-001 processed_pseudogene Homo_sapiens 0 477
ENST00000524496 RPL27A-007 protein_coding Homo_sapiens 0 405
ENST00000525981 RPL27A-010 protein_coding Homo_sapiens 7.9874e-44 180
ENST00000526562 RPL27A-009 protein_coding Homo_sapiens 0 366
ENST00000529227 RPL27A-002 retained_intron Homo_sapiens 1e-19 100
ENST00000530022 RPL27A-008 protein_coding Homo_sapiens 0 494
ENST00000530585 RPL27A-003 retained_intron Homo_sapiens 5e-29 132
ENST00000530913 RPL27A-011 protein_coding Homo_sapiens 0 366
ENST00000531978 RPL27A-004 protein_coding Homo_sapiens 0 320
ENST00000532359 RPL27A-006 protein_coding Homo_sapiens 0 250
ENST00000534599 RPL27A-005 nonsense_mediated_decay Homo_sapiens 0 405

Loading