C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 14407
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121260 Gm14407-001 ENSMUSG00000082023 10090 - 2:177085356-177085802 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastHeartKidneyLiverOvaryPlacentaTestisENSMUST00000121260
Transcript ID Adipose Adrenal Bladder Brain Breast Heart Kidney Liver Ovary Placenta Testis
ENSMUST00000121260 0.285±0.05 0.178±0.00 0.256±0.00 0.086±0.02 0.420±0.06 0.217±0.00 0.114±0.01 0.097±0.06 0.372±0.22 1.664±1.83 0.223±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000314138 RPL27A-001 protein_coding Homo_sapiens 0 512
ENST00000358609 RPL27AP-001 processed_pseudogene Homo_sapiens 0 357
ENST00000415679 RP11-226L15.1-001 processed_pseudogene Homo_sapiens 0 329
ENST00000424277 RPL27AP8-001 processed_pseudogene Homo_sapiens 0 335
ENST00000439114 AC114755.4-001 processed_pseudogene Homo_sapiens 0 226
ENST00000448912 AC104076.2-001 processed_pseudogene Homo_sapiens 0 335
ENST00000469428 RPL27AP5-001 processed_pseudogene Homo_sapiens 0 412
ENST00000492974 RP11-475C16.1-001 processed_pseudogene Homo_sapiens 0 496
ENST00000524496 RPL27A-007 protein_coding Homo_sapiens 0 412
ENST00000525981 RPL27A-010 protein_coding Homo_sapiens 1.96182e-44 182
ENST00000526562 RPL27A-009 protein_coding Homo_sapiens 0 379
ENST00000529227 RPL27A-002 retained_intron Homo_sapiens 6e-23 111
ENST00000530022 RPL27A-008 protein_coding Homo_sapiens 0 508
ENST00000530585 RPL27A-003 retained_intron Homo_sapiens 1e-30 137
ENST00000530913 RPL27A-011 protein_coding Homo_sapiens 0 379
ENST00000531978 RPL27A-004 protein_coding Homo_sapiens 0 337
ENST00000532359 RPL27A-006 protein_coding Homo_sapiens 0 252
ENST00000534599 RPL27A-005 nonsense_mediated_decay Homo_sapiens 0 412

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