C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 15727
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000122416 Gm15727-001 ENSMUSG00000081274 10090 - 5:117348907-117349344 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000122416
Transcript ID Adipose Adrenal Bladder Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000122416 1.963±1.34 2.085±1.13 2.680±0.74 2.099±1.31 5.943±2.65 0.148±0.05 0.848±0.28 0.173±0.12 1.874±1.10 0.432±0.14 2.642±1.47 0.322±0.10 8.636±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000314138 RPL27A-001 protein_coding Homo_sapiens 0 486
ENST00000358609 RPL27AP-001 processed_pseudogene Homo_sapiens 0 372
ENST00000415679 RP11-226L15.1-001 processed_pseudogene Homo_sapiens 0 333
ENST00000424277 RPL27AP8-001 processed_pseudogene Homo_sapiens 0 305
ENST00000448912 AC104076.2-001 processed_pseudogene Homo_sapiens 0 305
ENST00000469428 RPL27AP5-001 processed_pseudogene Homo_sapiens 0 387
ENST00000492974 RP11-475C16.1-001 processed_pseudogene Homo_sapiens 0 464
ENST00000524496 RPL27A-007 protein_coding Homo_sapiens 0 429
ENST00000525981 RPL27A-010 protein_coding Homo_sapiens 1.4013e-45 185
ENST00000526562 RPL27A-009 protein_coding Homo_sapiens 0 383
ENST00000530022 RPL27A-008 protein_coding Homo_sapiens 0 483
ENST00000530913 RPL27A-011 protein_coding Homo_sapiens 0 383
ENST00000532359 RPL27A-006 protein_coding Homo_sapiens 0 257
ENST00000534599 RPL27A-005 nonsense_mediated_decay Homo_sapiens 0 429

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