C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: eukaryotic translation elongation factor 1 alpha 1 pseudogene 29
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000416082 EEF1A1P29-001 ENSG00000215093 9606 - X:86160264-86161359 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBreastKidneyLiverLungOvaryPlacentaTestisENST00000416082
Transcript ID Adrenal Breast Kidney Liver Lung Ovary Placenta Testis
ENST00000416082 0.765±0.00 0.838±0.00 0.434±0.00 0.109±0.00 0.346±0.00 0.171±0.05 0.039±0.00 0.304±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0003LE CIL_0003LE_0001 CGP X:85861180-86832604
CIL_0007KY CIL_0007KY_0002 UCNEbase X:85969117-86193073
CIL_0003L9 CIL_0003L9_0001 CGP X:86148458-87670050

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000042235 Eef1a1-001 protein_coding Mus_musculus 0 760
ENSMUST00000118928 Gm13456-001 processed_pseudogene Mus_musculus 0 737
ENSMUST00000167498 Gm6548-001 processed_pseudogene Mus_musculus 0 721
ENSMUST00000187672 RP23-307G23.3-001 processed_pseudogene Mus_musculus 0 704
ENSMUST00000118650 Gm6767-001 processed_pseudogene Mus_musculus 0 665
ENSMUST00000150960 Eef1a1-002 retained_intron Mus_musculus 0 641
ENSMUST00000144523 Eef1a1-005 retained_intron Mus_musculus 0 625
ENSMUST00000121596 Gm12912-001 processed_pseudogene Mus_musculus 0 621
ENSMUST00000154207 Eef1a1-008 protein_coding Mus_musculus 0 597
ENSMUST00000161562 Gm5822-001 processed_pseudogene Mus_musculus 0 593
ENSMUST00000126614 Eef1a1-006 retained_intron Mus_musculus 0 459
ENSMUST00000143570 Eef1a1-007 processed_transcript Mus_musculus 0 381
ENSMUST00000129380 Eef1a1-004 retained_intron Mus_musculus 0 370
ENSMUST00000156988 Eef1a1-003 protein_coding Mus_musculus 0 364

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