C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heterogeneous nuclear ribonucleoprotein A1 pseudogene 22
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000437295 HNRNPA1P22-001 ENSG00000236459 9606 + 3:42889361-42890306 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000437295
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000437295 0.111±0.00 0.219±0.00 0.042±0.00 0.075±0.00 0.059±0.00 0.067±0.00 0.040±0.00 0.088±0.00 0.065±0.00 0.099±0.00 0.116±0.00 0.158±0.11 0.401±0.46 0.059±0.02

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000087351 Hnrnpa1-202 protein_coding Mus_musculus 0 1142
ENSMUST00000168019 Gm10052-001 processed_pseudogene Mus_musculus 0 1140
ENSMUST00000117081 Gm5643-001 processed_pseudogene Mus_musculus 0 1099
ENSMUST00000022493 Gm5803-001 processed_pseudogene Mus_musculus 0 1059
ENSMUST00000181363 Gm8652-001 processed_pseudogene Mus_musculus 0 1059
ENSMUST00000129154 Hnrnpa1l2-ps-001 processed_pseudogene Mus_musculus 0 1040
ENSMUST00000036004 Hnrnpa1-201 protein_coding Mus_musculus 0 926
ENSMUST00000050143 Gm7729-001 unprocessed_pseudogene Mus_musculus 0 924
ENSMUST00000040649 AC165425.1-201 pseudogene Mus_musculus 0 920
ENSMUST00000118970 Gm16216-001 processed_pseudogene Mus_musculus 0 887
ENSMUST00000119097 Gm13418-001 processed_pseudogene Mus_musculus 0 837
ENSMUST00000184038 Gm5269-001 translated_processed_pseudogene Mus_musculus 0 754
ENSMUST00000178732 RP24-383H12.1-001 processed_pseudogene Mus_musculus 0 682
ENSMUST00000122346 Gm11860-001 processed_pseudogene Mus_musculus 0 627
ENSMUST00000120205 Gm13297-001 processed_pseudogene Mus_musculus 0 595
ENSMUST00000183590 Gm5269-002 protein_coding Mus_musculus 6e-30 135

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