| Transcript ID | Brain |
|---|---|
| ENST00000440127 | 0.204±0.00 |
C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | high mobility group box 3 pseudogene 11 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000440127  |
HMGB3P11-001 |
ENSG00000213301 |
9606 | + |
2:104771282-104771885  |
processed_pseudogene |
Expression Patterns
|
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0004IW | CIL_0004IW_0002 | CGP | 2:102736908-104860471 |
| CIL_0007JQ | CIL_0007JQ_0001 | UCNEbase | 2:102922366-105081592 |
| CIL_0007T8 | CIL_0007T8_0001 | VISTA | 2:104216357-104817372 |
| CIL_0007ZQ | CIL_0007ZQ_0001 | VISTA | 2:104271403-104872401 |
| CIL_0008TY | CIL_0008TY_0001 | VISTA | 2:104337637-104939940 |
| CIL_0008JA | CIL_0008JA_0001 | VISTA | 2:104383886-104985199 |
| CIL_0008IN | CIL_0008IN_0001 | VISTA | 2:104401122-105003398 |
| CIL_0008O2 | CIL_0008O2_0001 | VISTA | 2:104536515-105137711 |
| CIL_0008KZ | CIL_0008KZ_0001 | VISTA | 2:104548528-105151080 |
| CIL_000902 | CIL_000902_0001 | VISTA | 2:104600279-105202032 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| No GO terms available. | ||
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000088874
|
Hmgb3-004 | protein_coding | Mus_musculus | 0 | 654 |
|
ENSMUST00000114582
|
Hmgb3-003 | protein_coding | Mus_musculus | 0 | 654 |
|
ENSMUST00000015361
|
Hmgb3-002 | protein_coding | Mus_musculus | 0 | 654 |
|
ENSMUST00000072699
|
Hmgb3-001 | protein_coding | Mus_musculus | 0 | 654 |
|
ENSMUST00000078030
|
Gm6104-201 | protein_coding | Mus_musculus | 0 | 647 |
|
ENSMUST00000132145
|
Hmgb3-006 | retained_intron | Mus_musculus | 0 | 621 |
|
ENSMUST00000121238
|
Gm11805-001 | processed_pseudogene | Mus_musculus | 0 | 595 |
|
ENSMUST00000120072
|
Gm5060-001 | processed_pseudogene | Mus_musculus | 0 | 538 |
|
ENSMUST00000123100
|
Hmgb3-005 | protein_coding | Mus_musculus | 0 | 514 |
|
ENSMUST00000117931
|
Gm12365-001 | processed_pseudogene | Mus_musculus | 0 | 505 |
|
ENSMUST00000155930
|
Gm8813-001 | processed_pseudogene | Mus_musculus | 0 | 494 |
|
ENSMUST00000117806
|
Gm15576-001 | processed_pseudogene | Mus_musculus | 0 | 481 |
|
ENSMUST00000176139
|
Gm18367-001 | processed_pseudogene | Mus_musculus | 0 | 481 |
|
ENSMUST00000117771
|
Gm5752-001 | processed_pseudogene | Mus_musculus | 0 | 390 |
