Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Accession	Transcript Name	Contained in Gene	Tax ID	Strand	Position	Biotype
Transcript Info
Description:	ribosomal protein L13 pseudogene 2
ENST00000440687	RPL13P2-001	ENSG00000213820	9606	+	20:46099518-46100176	processed_pseudogene

Expression Patterns

Transcript ID	Adipose	Adrenal	Brain	Breast	Colon	Heart	Kidney	Liver	Lung	Muscle	Ovary	Testis
ENST00000440687	0.173±0.00	0.714±0.00	0.283±0.00	0.639±0.00	1.003±0.00	0.045±0.00	0.262±0.00	0.134±0.00	0.656±0.00	0.249±0.00	0.137±0.00	0.532±0.00

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_0007BI	CIL_0007BI_0001	CGP	20:46060985-46129863

Gene Ontology
GO ID	Evidence Type	GO Description
No GO terms available.

Homologs
ENSEMBL Accession	Gene Name	Biotype	Species	E-Value	Bit Score
ENSMUST00000120234	Gm12918-001	processed_pseudogene	Mus_musculus	0	396
ENSMUST00000000756	Rpl13-001	protein_coding	Mus_musculus	0	396
ENSMUST00000121821	Gm15710-001	processed_pseudogene	Mus_musculus	0	390
ENSMUST00000079761	Gm10071-201	processed_pseudogene	Mus_musculus	0	385
ENSMUST00000121801	Rpl13-ps1-001	processed_pseudogene	Mus_musculus	0	366
ENSMUST00000104990	Gm7290-001	processed_pseudogene	Mus_musculus	0	322
ENSMUST00000079960	Rpl13-ps3-201	protein_coding	Mus_musculus	0	313
ENSMUST00000120713	Gm14585-001	processed_pseudogene	Mus_musculus	0	300
ENSMUST00000132275	Rpl13-004	retained_intron	Mus_musculus	0	283
ENSMUST00000121199	Gm12466-001	processed_pseudogene	Mus_musculus	0	268
ENSMUST00000117813	Rpl13-ps5-001	processed_pseudogene	Mus_musculus	0	257
ENSMUST00000129311	Rpl13-002	retained_intron	Mus_musculus	0	241
ENSMUST00000119124	Gm15131-001	processed_pseudogene	Mus_musculus	0	239
ENSMUST00000152444	Rpl13-003	retained_intron	Mus_musculus	0	209
ENSMUST00000119734	Gm12011-001	processed_pseudogene	Mus_musculus	0	204

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