C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 8 pseudogene 44
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000441609 KRT8P44-001 ENSG00000227913 9606 + 6:162568379-162569728 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainHeartLiverLungTestisENST00000441609
Transcript ID Adrenal Bladder Brain Heart Liver Lung Testis
ENST00000441609 0.028±0.00 0.030±0.00 0.031±0.00 0.062±0.00 0.013±0.00 0.059±0.00 0.037±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000800 CIL_000800_0001 VISTA 6:162116037-162718515
CIL_0009AN CIL_0009AN_0001 VISTA 6:162555798-163158898

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023714 4732456N10Rik-001 protein_coding Mus_musculus 0 267
ENSMUST00000023709 Krt5-001 protein_coding Mus_musculus 0 246
ENSMUST00000023786 Krt6b-201 protein_coding Mus_musculus 1.4013e-45 187
ENSMUST00000023788 Krt6a-201 protein_coding Mus_musculus 4.99983e-42 176
ENSMUST00000100184 Gm5478-201 protein_coding Mus_musculus 2e-30 137
ENSMUST00000087996 Krt77-001 protein_coding Mus_musculus 3e-29 134
ENSMUST00000023797 Krt4-201 protein_coding Mus_musculus 1e-27 128
ENSMUST00000023712 Krt2-001 protein_coding Mus_musculus 1e-23 115

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