C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000445182 RP11-350G13.1-001 ENSG00000226327 9606 + 9:88324454-88325339 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverLungMuscleTestisENST00000445182
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Lung Muscle Testis
ENST00000445182 0.073±0.00 0.252±0.00 0.126±0.00 0.041±0.00 0.110±0.00 0.098±0.00 0.153±0.00 0.036±0.00 0.082±0.00 0.110±0.07

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000035105 Rpsa-201 protein_coding Mus_musculus 0 972
ENSMUST00000057740 Rpsa-ps10-201 protein_coding Mus_musculus 0 972
ENSMUST00000120702 Rpsa-ps9-001 processed_pseudogene Mus_musculus 0 950
ENSMUST00000121691 Rpsa-ps4-001 processed_pseudogene Mus_musculus 0 922
ENSMUST00000191040 Rpsa-ps1-001 processed_pseudogene Mus_musculus 0 885
ENSMUST00000118446 Rpsa-ps11-001 processed_pseudogene Mus_musculus 0 857
ENSMUST00000120423 Gm9083-001 processed_pseudogene Mus_musculus 0 846
ENSMUST00000186198 RP23-2I19.1-001 processed_pseudogene Mus_musculus 0 664
ENSMUST00000118817 Gm5764-001 processed_pseudogene Mus_musculus 0 660
ENSMUST00000059546 Rpsa-ps2-201 processed_pseudogene Mus_musculus 0 579
ENSDART00000135945 rpsa-001 protein_coding Danio_rerio 0 501

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