C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description: ribosomal protein SA pseudogene 23
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000446095 RPSAP23-001 ENSG00000230391 9606 + 2:115468056-115468938 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainTestisENST00000446095
Transcript ID Adipose Adrenal Brain Testis
ENST00000446095 0.016±0.00 0.035±0.00 0.037±0.00 0.116±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0002WV CIL_0002WV_0002 CGP 2:113889960-115845752

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000057740 Rpsa-ps10-201 protein_coding Mus_musculus 0 691
ENSMUST00000035105 Rpsa-201 protein_coding Mus_musculus 0 675
ENSMUST00000121691 Rpsa-ps4-001 processed_pseudogene Mus_musculus 0 652
ENSMUST00000120191 Gm11824-001 processed_pseudogene Mus_musculus 0 647
ENSMUST00000120702 Rpsa-ps9-001 processed_pseudogene Mus_musculus 0 641
ENSMUST00000191040 Rpsa-ps1-001 processed_pseudogene Mus_musculus 0 616
ENSMUST00000120423 Gm9083-001 processed_pseudogene Mus_musculus 0 614
ENSMUST00000118446 Rpsa-ps11-001 processed_pseudogene Mus_musculus 0 604
ENSMUST00000120596 Rpsa-ps12-001 processed_pseudogene Mus_musculus 0 595
ENSMUST00000118817 Gm5764-001 processed_pseudogene Mus_musculus 0 483
ENSMUST00000059546 Rpsa-ps2-201 processed_pseudogene Mus_musculus 0 422

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