C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000454107 RP11-57G10.1-001 ENSG00000225922 9606 + 10:67793770-67794245 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBrainBreastColonHeartKidneyLiverLungMuscleTestisENST00000454107
Transcript ID Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Testis
ENST00000454107 0.030±0.00 0.031±0.00 0.029±0.00 0.055±0.00 0.029±0.00 0.030±0.00 0.027±0.00 0.028±0.00 0.083±0.00 0.027±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000160079 Gm3355-001 processed_pseudogene Mus_musculus 0 425
ENSMUST00000099272 Rpl21-003 protein_coding Mus_musculus 0 424
ENSMUST00000075453 Rpl21-002 protein_coding Mus_musculus 0 424
ENSMUST00000035983 Rpl21-001 protein_coding Mus_musculus 0 424
ENSMUST00000130005 Rpl21-ps8-001 processed_pseudogene Mus_musculus 0 420
ENSMUST00000121545 Rpl21-ps15-001 processed_pseudogene Mus_musculus 0 409
ENSMUST00000119328 Gm14648-001 processed_pseudogene Mus_musculus 0 409
ENSMUST00000155008 Gm10163-001 processed_pseudogene Mus_musculus 0 409
ENSMUST00000121309 Gm13370-001 processed_pseudogene Mus_musculus 0 409
ENSMUST00000089785 Gm10240-001 processed_pseudogene Mus_musculus 0 409
ENSMUST00000118352 Gm11703-001 processed_pseudogene Mus_musculus 0 409
ENSMUST00000084598 Gm10155-201 processed_pseudogene Mus_musculus 0 403
ENSMUST00000080279 Rpl21-ps14-201 processed_pseudogene Mus_musculus 0 403
ENSMUST00000095268 Gm9104-001 processed_pseudogene Mus_musculus 0 398
ENSMUST00000119140 Gm12411-001 processed_pseudogene Mus_musculus 0 398
ENSMUST00000178657 Gm10045-001 processed_pseudogene Mus_musculus 0 398
ENSMUST00000080330 Gm10916-201 processed_pseudogene Mus_musculus 0 398
ENSMUST00000077420 Rpl21-ps7-201 processed_pseudogene Mus_musculus 0 398
ENSMUST00000119897 Rpl21-ps9-001 processed_pseudogene Mus_musculus 0 394
ENSMUST00000121563 Gm15682-001 processed_pseudogene Mus_musculus 0 392
ENSMUST00000122260 Gm13653-001 processed_pseudogene Mus_musculus 0 392
ENSMUST00000076314 Gm5528-001 processed_pseudogene Mus_musculus 0 392
ENSMUST00000180049 Gm6919-001 processed_pseudogene Mus_musculus 0 387
ENSMUST00000179660 Gm16416-201 processed_pseudogene Mus_musculus 0 381
ENSMUST00000093411 Gm8054-201 processed_pseudogene Mus_musculus 0 377
ENSMUST00000117993 Gm13641-001 processed_pseudogene Mus_musculus 0 374
ENSMUST00000077278 Rpl21-ps11-201 processed_pseudogene Mus_musculus 0 366
ENSMUST00000119542 Gm15921-001 processed_pseudogene Mus_musculus 0 364
ENSMUST00000153140 Gm16060-001 processed_pseudogene Mus_musculus 0 363
ENSMUST00000119242 Gm14115-001 processed_pseudogene Mus_musculus 0 348
ENSMUST00000130905 Gm6689-001 processed_pseudogene Mus_musculus 0 327
ENSMUST00000120315 Gm9378-001 processed_pseudogene Mus_musculus 0 294
ENSMUST00000122454 Gm8840-001 processed_pseudogene Mus_musculus 0 276
ENSMUST00000119262 Gm12944-001 processed_pseudogene Mus_musculus 0 263
ENSMUST00000080237 Rpl21-ps4-201 protein_coding Mus_musculus 0 250
ENSMUST00000118827 Gm15312-001 processed_pseudogene Mus_musculus 0 206
ENSMUST00000121644 Gm15309-001 processed_pseudogene Mus_musculus 0 202
ENSMUST00000185232 RP23-478I8.1-001 processed_pseudogene Mus_musculus 8.00001e-41 171
ENSMUST00000151871 Rpl21-005 retained_intron Mus_musculus 8e-31 137
ENSMUST00000154768 Rpl21-004 retained_intron Mus_musculus 5e-18 95

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