C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 5528
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000076314 Gm5528-001 ENSMUSG00000059483 10090 + 1:72004288-72004767 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; BladderBrainKidneyLiverPlacentaTestisENSMUST00000076314
Transcript ID Bladder Brain Kidney Liver Placenta Testis
ENSMUST00000076314 0.024±0.00 0.045±0.00 0.223±0.00 0.125±0.00 0.206±0.00 0.200±0.10

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0005MJ CIL_0005MJ_0002 CGP 1:71585520-72212307

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000247219 TBPL2-001 protein_coding Homo_sapiens 0 263
ENST00000272274 RPL21-003 protein_coding Homo_sapiens 0 580
ENST00000311549 RPL21-001 protein_coding Homo_sapiens 0 580
ENST00000319826 RPL21-004 protein_coding Homo_sapiens 0 580
ENST00000326092 RPL21-005 protein_coding Homo_sapiens 0 580
ENST00000396599 RPL21P75-001 processed_pseudogene Homo_sapiens 0 575
ENST00000401418 RPL21P28-001 processed_pseudogene Homo_sapiens 0 564
ENST00000402896 RPL21P67-001 processed_pseudogene Homo_sapiens 0 387
ENST00000403842 RP11-203F10.6-001 processed_pseudogene Homo_sapiens 0 536
ENST00000404609 RP3-393E18.1-001 processed_pseudogene Homo_sapiens 0 501
ENST00000406094 RPL21P65-001 processed_pseudogene Homo_sapiens 0 370
ENST00000413857 RPL21P108-001 processed_pseudogene Homo_sapiens 0 241
ENST00000415692 RP11-248J23.5-001 processed_pseudogene Homo_sapiens 0 394
ENST00000416622 RP11-329A14.2-001 processed_pseudogene Homo_sapiens 0 385
ENST00000417077 RP11-339A7.1-001 processed_pseudogene Homo_sapiens 0 462
ENST00000418441 RP11-151F5.2-001 processed_pseudogene Homo_sapiens 0 525
ENST00000418453 RPL21P111-001 processed_pseudogene Homo_sapiens 0 438
ENST00000422509 RP11-405L18.4-001 processed_pseudogene Homo_sapiens 0 438
ENST00000423231 RP11-26H16.1-001 processed_pseudogene Homo_sapiens 0 520
ENST00000439130 RP11-244N20.7-001 processed_pseudogene Homo_sapiens 0 435
ENST00000446654 RPL21P23-001 processed_pseudogene Homo_sapiens 0 309
ENST00000453468 RPL21P134-001 processed_pseudogene Homo_sapiens 0 531
ENST00000454107 RP11-57G10.1-001 processed_pseudogene Homo_sapiens 0 392
ENST00000454675 AC092155.1-001 processed_pseudogene Homo_sapiens 0 532
ENST00000460608 CTD-2301A4.3-001 processed_pseudogene Homo_sapiens 0 435
ENST00000461458 RPL21P11-001 processed_pseudogene Homo_sapiens 0 553
ENST00000461690 RPL21-007 nonsense_mediated_decay Homo_sapiens 0 553
ENST00000463339 RP11-690D19.1-001 processed_pseudogene Homo_sapiens 0 368
ENST00000465295 RP11-30K9.1-001 processed_pseudogene Homo_sapiens 0 499
ENST00000465598 RPL21P71-001 processed_pseudogene Homo_sapiens 3e-25 119
ENST00000466550 RPL21-006 retained_intron Homo_sapiens 0 339
ENST00000471393 RP11-400K9.1-001 processed_pseudogene Homo_sapiens 0 381
ENST00000472093 RP11-267J23.1-001 processed_pseudogene Homo_sapiens 0 329
ENST00000472300 RP11-16F15.2-001 processed_pseudogene Homo_sapiens 0 542
ENST00000473558 RPL21-002 retained_intron Homo_sapiens 0 202
ENST00000473808 RP11-254G11.1-001 processed_pseudogene Homo_sapiens 0 499
ENST00000477341 RP11-734J24.1-001 processed_pseudogene Homo_sapiens 0 523
ENST00000479116 RP11-73B8.1-001 processed_pseudogene Homo_sapiens 0 481
ENST00000479171 RPL21P6-001 processed_pseudogene Homo_sapiens 0 263
ENST00000482506 RPL21P116-001 processed_pseudogene Homo_sapiens 0 525
ENST00000482905 RPL21P120-001 processed_pseudogene Homo_sapiens 0 492
ENST00000483765 RPL21-008 nonsense_mediated_decay Homo_sapiens 2e-22 110
ENST00000485147 RP11-407P2.1-001 processed_pseudogene Homo_sapiens 0 520
ENST00000485945 RP11-613M5.2-001 processed_pseudogene Homo_sapiens 0 569
ENST00000486753 RP11-48B14.1-001 processed_pseudogene Homo_sapiens 0 525
ENST00000488289 RP13-585F24.1-001 processed_pseudogene Homo_sapiens 0 536
ENST00000491435 RP11-50D9.1-001 processed_pseudogene Homo_sapiens 0 558
ENST00000491732 RPL21P129-001 processed_pseudogene Homo_sapiens 0 420
ENST00000492168 RP11-330L19.2-001 processed_pseudogene Homo_sapiens 0 363
ENST00000493028 RPL21P123-001 transcribed_processed_pseudogene Homo_sapiens 0 300
ENST00000493317 RPL21-009 protein_coding Homo_sapiens 0 470
ENST00000493466 RP11-9D8.1-001 processed_pseudogene Homo_sapiens 0 488
ENST00000495531 RP11-572P18.1-001 processed_pseudogene Homo_sapiens 0 580
ENST00000497954 RPL21P4-001 processed_pseudogene Homo_sapiens 0 505
ENST00000510061 AC006445.7-001 processed_pseudogene Homo_sapiens 0 388
ENST00000515262 HSPA4L-005 processed_transcript Homo_sapiens 0 250
ENST00000557463 RPL21P7-001 processed_pseudogene Homo_sapiens 0 497
ENST00000559810 RPL21P12-001 processed_pseudogene Homo_sapiens 0 359
ENST00000600955 RP1-228H13.1-001 processed_pseudogene Homo_sapiens 0 507
ENST00000610672 MED22-007 protein_coding Homo_sapiens 0 435

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