C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12944
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119262 Gm12944-001 ENSMUSG00000084149 10090 + 4:127056262-127056724 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000119262
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000119262 0.373±0.22 0.455±0.11 0.150±0.02 0.687±0.36 0.943±0.25 0.810±0.10 0.583±0.38 0.612±0.20 0.345±0.19 0.738±0.44 0.113±0.00 1.340±1.32 0.639±0.54 0.452±0.26

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000247219 TBPL2-001 protein_coding Homo_sapiens 3.00004e-41 174
ENST00000272274 RPL21-003 protein_coding Homo_sapiens 0 436
ENST00000311549 RPL21-001 protein_coding Homo_sapiens 0 436
ENST00000319826 RPL21-004 protein_coding Homo_sapiens 0 436
ENST00000326092 RPL21-005 protein_coding Homo_sapiens 0 436
ENST00000396599 RPL21P75-001 processed_pseudogene Homo_sapiens 0 431
ENST00000401418 RPL21P28-001 processed_pseudogene Homo_sapiens 0 425
ENST00000402896 RPL21P67-001 processed_pseudogene Homo_sapiens 0 263
ENST00000404609 RP3-393E18.1-001 processed_pseudogene Homo_sapiens 0 364
ENST00000406094 RPL21P65-001 processed_pseudogene Homo_sapiens 0 243
ENST00000417077 RP11-339A7.1-001 processed_pseudogene Homo_sapiens 0 333
ENST00000418441 RP11-151F5.2-001 processed_pseudogene Homo_sapiens 0 381
ENST00000422509 RP11-405L18.4-001 processed_pseudogene Homo_sapiens 0 287
ENST00000423231 RP11-26H16.1-001 processed_pseudogene Homo_sapiens 0 364
ENST00000439130 RP11-244N20.7-001 processed_pseudogene Homo_sapiens 0 278
ENST00000446654 RPL21P23-001 processed_pseudogene Homo_sapiens 3e-40 169
ENST00000453468 RPL21P134-001 processed_pseudogene Homo_sapiens 0 375
ENST00000454107 RP11-57G10.1-001 processed_pseudogene Homo_sapiens 0 263
ENST00000454675 AC092155.1-001 processed_pseudogene Homo_sapiens 0 370
ENST00000460608 CTD-2301A4.3-001 processed_pseudogene Homo_sapiens 0 300
ENST00000461458 RPL21P11-001 processed_pseudogene Homo_sapiens 0 398
ENST00000461690 RPL21-007 nonsense_mediated_decay Homo_sapiens 0 414
ENST00000465598 RPL21P71-001 processed_pseudogene Homo_sapiens 0 313
ENST00000466550 RPL21-006 retained_intron Homo_sapiens 0 196
ENST00000471393 RP11-400K9.1-001 processed_pseudogene Homo_sapiens 0 279
ENST00000472093 RP11-267J23.1-001 processed_pseudogene Homo_sapiens 0 196
ENST00000472300 RP11-16F15.2-001 processed_pseudogene Homo_sapiens 0 398
ENST00000473558 RPL21-002 retained_intron Homo_sapiens 0 193
ENST00000473808 RP11-254G11.1-001 processed_pseudogene Homo_sapiens 0 375
ENST00000477341 RP11-734J24.1-001 processed_pseudogene Homo_sapiens 0 372
ENST00000479171 RPL21P6-001 processed_pseudogene Homo_sapiens 6.00036e-42 174
ENST00000482506 RPL21P116-001 processed_pseudogene Homo_sapiens 0 370
ENST00000482905 RPL21P120-001 processed_pseudogene Homo_sapiens 0 340
ENST00000483765 RPL21-008 nonsense_mediated_decay Homo_sapiens 2e-22 110
ENST00000485147 RP11-407P2.1-001 processed_pseudogene Homo_sapiens 0 363
ENST00000485945 RP11-613M5.2-001 processed_pseudogene Homo_sapiens 0 407
ENST00000486753 RP11-48B14.1-001 processed_pseudogene Homo_sapiens 0 381
ENST00000488289 RP13-585F24.1-001 processed_pseudogene Homo_sapiens 0 398
ENST00000488305 RPL21P13-001 processed_pseudogene Homo_sapiens 0 279
ENST00000491435 RP11-50D9.1-001 processed_pseudogene Homo_sapiens 0 418
ENST00000493028 RPL21P123-001 transcribed_processed_pseudogene Homo_sapiens 1.00053e-42 176
ENST00000493317 RPL21-009 protein_coding Homo_sapiens 0 313
ENST00000493466 RP11-9D8.1-001 processed_pseudogene Homo_sapiens 0 353
ENST00000495531 RP11-572P18.1-001 processed_pseudogene Homo_sapiens 0 436
ENST00000497954 RPL21P4-001 processed_pseudogene Homo_sapiens 0 377
ENST00000510061 AC006445.7-001 processed_pseudogene Homo_sapiens 0 270
ENST00000515262 HSPA4L-005 processed_transcript Homo_sapiens 5.04467e-44 182
ENST00000557463 RPL21P7-001 processed_pseudogene Homo_sapiens 0 331
ENST00000559810 RPL21P12-001 processed_pseudogene Homo_sapiens 0 235
ENST00000600955 RP1-228H13.1-001 processed_pseudogene Homo_sapiens 0 361
ENST00000610672 MED22-007 protein_coding Homo_sapiens 0 278

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