C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 15
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000148502 Krt15-002 ENSMUSG00000054146 10090 - 11:100133035-100134398 retained_intron

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainColonHeartLiverLungMuscleOvaryPlacentaTestisENSMUST00000148502
Transcript ID Brain Colon Heart Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000148502 0.691±0.00 0.271±0.18 0.101±0.04 0.027±0.00 0.546±0.00 0.044±0.00 0.623±0.23 2.750±1.88 1.592±1.25

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056U CIL_00056U_0011 CGP 11:100117327-100135928
CIL_00056U CIL_00056U_0017 CGP 11:100131758-100148665

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000254043 KRT15-001 protein_coding Homo_sapiens 0 767
ENST00000300992 KRT17P2-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 283
ENST00000311208 KRT17-001 protein_coding Homo_sapiens 0 331
ENST00000326333 KRT17P2-002 processed_transcript Homo_sapiens 0 250
ENST00000361566 KRT19-001 protein_coding Homo_sapiens 0 233
ENST00000393974 KRT15-004 protein_coding Homo_sapiens 0 774
ENST00000393976 KRT15-007 protein_coding Homo_sapiens 0 767
ENST00000399211 KRT17P1-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 294
ENST00000417510 KRT16P6-002 processed_transcript Homo_sapiens 0 228
ENST00000425692 KRT16P6-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 274
ENST00000455635 KRT19-002 protein_coding Homo_sapiens 1.4013e-45 187
ENST00000458290 KRT15-006 protein_coding Homo_sapiens 0 717
ENST00000463128 KRT17-002 protein_coding Homo_sapiens 0 257
ENST00000463447 KRT15-005 retained_intron Homo_sapiens 0 560
ENST00000468880 KRT19-005 retained_intron Homo_sapiens 0 211
ENST00000474031 KRT15-008 retained_intron Homo_sapiens 0 774
ENST00000479031 KRT19-004 retained_intron Homo_sapiens 0 191
ENST00000493253 KRT17-003 retained_intron Homo_sapiens 4.06377e-44 183
ENST00000507547 KRT19P3-001 processed_pseudogene Homo_sapiens 1e-35 154
ENST00000540235 KRT17-201 protein_coding Homo_sapiens 0 331
ENST00000577449 KRT17P1-005 retained_intron Homo_sapiens 3e-36 156
ENST00000581013 KRT17P6-002 processed_transcript Homo_sapiens 3e-35 152
ENST00000582224 KRT17P1-002 retained_intron Homo_sapiens 9.80909e-45 183
ENST00000584769 KRT17P2-003 processed_transcript Homo_sapiens 0 250
ENST00000590038 KRT17-006 protein_coding Homo_sapiens 0 200
ENST00000593096 KRT19-007 protein_coding Homo_sapiens 0 224

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