C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L5 pseudogene 24
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000463742 RPL5P24-001 ENSG00000244052 9606 - 8:102923371-102924255 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000463742
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000463742 0.026±0.00 0.081±0.00 0.057±0.00 0.013±0.00 0.078±0.00 0.152±0.09 0.145±0.04 0.067±0.00 0.036±0.00 0.047±0.02 0.036±0.00 0.103±0.09 0.135±0.08

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0004T5 CIL_0004T5_0003 CGP 8:102826357-103073051

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000071523 Gm15500-001 transcribed_processed_pseudogene Mus_musculus 0 1002
ENSMUST00000071641 Gm15500-002 processed_transcript Mus_musculus 0 1002
ENSMUST00000082223 Rpl5-001 protein_coding Mus_musculus 0 1002
ENSMUST00000121367 Rpl5-ps1-001 processed_pseudogene Mus_musculus 0 968
ENSMUST00000119057 Rpl5-ps2-001 processed_pseudogene Mus_musculus 0 952
ENSMUST00000153590 Rpl5-002 protein_coding Mus_musculus 0 701
ENSMUST00000123183 Rpl5-003 retained_intron Mus_musculus 0 579
ENSMUST00000169624 Gm19840-001 processed_pseudogene Mus_musculus 0 547
ENSMUST00000140659 Rpl5-005 retained_intron Mus_musculus 0 427
ENSMUST00000118662 Gm15616-001 processed_pseudogene Mus_musculus 0 377
ENSMUST00000118025 Gm15766-001 processed_pseudogene Mus_musculus 0 363
ENSMUST00000129944 Rpl5-004 retained_intron Mus_musculus 0 267

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