C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info

Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000472881 RP11-959F10.5-001 ENSG00000253547 9606 + 11:63046785-63048126 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainHeartLungENST00000472881
Transcript ID Adipose Brain Heart Lung
ENST00000472881 0.012±0.00 0.188±0.00 0.022±0.00 0.494±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000079464 Tuba4a-002 protein_coding Mus_musculus 0 1192
ENSMUST00000186213 Tuba4a-001 protein_coding Mus_musculus 0 1192
ENSMUST00000058914 Tuba1c-201 protein_coding Mus_musculus 0 933
ENSMUST00000077577 Tuba1b-001 protein_coding Mus_musculus 0 928
ENSMUST00000097014 Tuba1a-001 protein_coding Mus_musculus 0 889
ENSMUST00000122404 Gm14150-001 processed_pseudogene Mus_musculus 0 887
ENSMUST00000077991 Gm5620-001 processed_pseudogene Mus_musculus 0 872
ENSMUST00000188593 Tuba4a-003 protein_coding Mus_musculus 0 856
ENSDART00000016360 protein_coding Danio_rerio 0 632
ENSDART00000102713 protein_coding Danio_rerio 0 632
ENSDART00000102715 tuba8l3-001 protein_coding Danio_rerio 0 595
ENSMUST00000186971 Tuba4a-008 protein_coding Mus_musculus 0 405
ENSMUST00000120657 Gm12201-001 processed_pseudogene Mus_musculus 0 370
ENSMUST00000187103 Tuba4a-005 retained_intron Mus_musculus 0 340
ENSMUST00000186758 Tuba4a-004 protein_coding Mus_musculus 0 333
ENSMUST00000190717 Tuba4a-006 protein_coding Mus_musculus 0 309
ENSMUST00000189131 Tuba4a-007 protein_coding Mus_musculus 0 278
ENSMUST00000169182 Gm3756-201 processed_pseudogene Mus_musculus 0 220
ENSMUST00000169666 Gm6682-201 processed_pseudogene Mus_musculus 0 207
ENSMUST00000140969 Tuba1b-002 retained_intron Mus_musculus 4.99983e-42 176

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