C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L5 pseudogene 29
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000482972 RPL5P29-001 ENSG00000242208 9606 + 11:56357328-56358221 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLungMuscleOvaryTestisENST00000482972
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Lung Muscle Ovary Testis
ENST00000482972 0.096±0.00 0.112±0.00 0.014±0.00 0.068±0.00 0.116±0.00 0.026±0.00 0.028±0.00 0.181±0.00 0.076±0.00 0.103±0.00 0.063±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000071523 Gm15500-001 transcribed_processed_pseudogene Mus_musculus 0 1014
ENSMUST00000071641 Gm15500-002 processed_transcript Mus_musculus 0 1014
ENSMUST00000082223 Rpl5-001 protein_coding Mus_musculus 0 1014
ENSMUST00000121367 Rpl5-ps1-001 processed_pseudogene Mus_musculus 0 970
ENSMUST00000119057 Rpl5-ps2-001 processed_pseudogene Mus_musculus 0 965
ENSMUST00000153590 Rpl5-002 protein_coding Mus_musculus 0 719
ENSMUST00000123183 Rpl5-003 retained_intron Mus_musculus 0 616
ENSMUST00000169624 Gm19840-001 processed_pseudogene Mus_musculus 0 599
ENSMUST00000118662 Gm15616-001 processed_pseudogene Mus_musculus 0 409
ENSMUST00000118025 Gm15766-001 processed_pseudogene Mus_musculus 0 405
ENSMUST00000140659 Rpl5-005 retained_intron Mus_musculus 0 403
ENSMUST00000118779 Gm11313-001 processed_pseudogene Mus_musculus 0 309
ENSMUST00000129944 Rpl5-004 retained_intron Mus_musculus 0 261
ENSMUST00000151767 Rpl5-006 retained_intron Mus_musculus 0 224
ENSMUST00000121897 Gm15877-001 processed_pseudogene Mus_musculus 0 217

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