C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 8 pseudogene 36
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000489121 KRT8P36-001 ENSG00000240668 9606 - 3:138101478-138102917 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000489121
Transcript ID Adipose Bladder Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000489121 0.013±0.00 0.221±0.00 0.061±0.00 0.024±0.00 0.052±0.00 0.076±0.00 0.119±0.07 0.270±0.05 0.081±0.09 0.253±0.07 0.274±0.22

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007YL CIL_0007YL_0001 VISTA 3:137620069-138221266

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000023952 Krt8-201 protein_coding Mus_musculus 0 1221
ENSMUST00000023714 4732456N10Rik-001 protein_coding Mus_musculus 0 449
ENSMUST00000023709 Krt5-001 protein_coding Mus_musculus 0 418
ENSMUST00000023786 Krt6b-201 protein_coding Mus_musculus 0 309
ENSMUST00000023788 Krt6a-201 protein_coding Mus_musculus 0 298
ENSMUST00000100179 Krt76-001 protein_coding Mus_musculus 0 248
ENSMUST00000023799 Krt79-001 protein_coding Mus_musculus 1.00053e-42 178
ENSMUST00000087996 Krt77-001 protein_coding Mus_musculus 7e-36 156
ENSMUST00000100184 Gm5478-201 protein_coding Mus_musculus 1e-33 148
ENSMUST00000023720 Krt84-201 protein_coding Mus_musculus 1e-28 132
ENSDART00000063484 si:dkey-222f2.1-001 protein_coding Danio_rerio 7e-21 106
ENSDART00000028270 gfap-001 protein_coding Danio_rerio 0.00003 55

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