Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Accession	Transcript Name	Contained in Gene	Tax ID	Strand	Position	Biotype
Transcript Info
Description:	heterogeneous nuclear ribonucleoprotein A1 pseudogene 56
ENST00000505767	HNRNPA1P56-001	ENSG00000248640	9606	-	4:77987860-77988813	processed_pseudogene

Expression Patterns

Transcript ID	Adipose	Adrenal	Brain	Breast	Colon	Kidney	Liver	Lung	Muscle	Ovary	Placenta	Testis
ENST00000505767	0.028±0.00	0.101±0.00	0.059±0.00	0.087±0.00	0.027±0.00	0.058±0.00	0.026±0.00	0.014±0.00	0.051±0.00	0.015±0.00	0.020±0.00	0.039±0.00

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_00051W	CIL_00051W_0002	CGP	4:77862520-78544269

Gene Ontology
GO ID	Evidence Type	GO Description
No GO terms available.

Homologs
ENSEMBL Accession	Gene Name	Biotype	Species	E-Value	Bit Score
ENSMUST00000087351	Hnrnpa1-202	protein_coding	Mus_musculus	0	1155
ENSMUST00000168019	Gm10052-001	processed_pseudogene	Mus_musculus	0	1153
ENSMUST00000117081	Gm5643-001	processed_pseudogene	Mus_musculus	0	1118
ENSMUST00000022493	Gm5803-001	processed_pseudogene	Mus_musculus	0	1094
ENSMUST00000181363	Gm8652-001	processed_pseudogene	Mus_musculus	0	1066
ENSMUST00000129154	Hnrnpa1l2-ps-001	processed_pseudogene	Mus_musculus	0	1053
ENSMUST00000050143	Gm7729-001	unprocessed_pseudogene	Mus_musculus	0	876
ENSMUST00000036004	Hnrnpa1-201	protein_coding	Mus_musculus	0	876
ENSMUST00000119097	Gm13418-001	processed_pseudogene	Mus_musculus	0	872
ENSMUST00000118970	Gm16216-001	processed_pseudogene	Mus_musculus	0	859
ENSMUST00000178732	RP24-383H12.1-001	processed_pseudogene	Mus_musculus	0	771
ENSMUST00000120205	Gm13297-001	processed_pseudogene	Mus_musculus	0	617
ENSMUST00000122346	Gm11860-001	processed_pseudogene	Mus_musculus	8e-34	148
ENSMUST00000040649	AC165425.1-201	pseudogene	Mus_musculus	0	939

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