C-It-Loci: A knowledge database for tissue-enriched loci.
Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main
Transcript Info |
||||||
| Description: | SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 | |||||
|---|---|---|---|---|---|---|
| Transcript Accession | Transcript Name | Contained in Gene | Tax ID | Strand | Position | Biotype |
ENST00000592158  |
SMARCA4-018 |
ENSG00000127616 |
9606 | + |
19:11030813-11041466  |
protein_coding |
Expression PatternsNo expression data. |
Conserved Regions | |||
|---|---|---|---|
| Region ID | Sub-Region | Region Type | Position |
| CIL_0002S7 | CIL_0002S7_0001 | CGP | 19:10928733-11065395 |
| CIL_00058P | CIL_00058P_0003 | CGP | 19:10961001-11133816 |
Gene Ontology | ||
|---|---|---|
| GO ID | Evidence Type | GO Description |
| GO:0005634 | IDA | nucleus |
| GO:0005730 | IDA | nucleolus |
| GO:0042393 | IEA | histone binding |
Homologs | |||||
| ENSEMBL Accession | Gene Name | Biotype | Species | E-Value | Bit Score |
|
ENSMUST00000098948
|
Smarca4-201 | protein_coding | Mus_musculus | 0 | 433 |
|
ENSMUST00000172996
|
Smarca4-002 | protein_coding | Mus_musculus | 0 | 433 |
|
ENSMUST00000174008
|
Smarca4-003 | protein_coding | Mus_musculus | 0 | 374 |
|
ENSMUST00000034707
|
Smarca4-001 | protein_coding | Mus_musculus | 0 | 374 |
|
ENSDART00000003698
|
SMARCA4 (1 of 2)-201 | protein_coding | Danio_rerio | 0 | 198 |
|
ENSDART00000115110
|
smarca4-201 | protein_coding | Danio_rerio | 5e-37 | 158 |
|
ENSDART00000134514
|
smarca4-001 | protein_coding | Danio_rerio | 5e-37 | 158 |
|
ENSMUST00000175935
|
Smarca2-004 | processed_transcript | Mus_musculus | 7e-26 | 121 |
|
ENSMUST00000176769
|
Smarca2-005 | protein_coding | Mus_musculus | 7e-26 | 121 |
|
ENSMUST00000099537
|
Smarca2-002 | nonsense_mediated_decay | Mus_musculus | 7e-26 | 121 |
|
ENSMUST00000176030
|
Smarca2-003 | protein_coding | Mus_musculus | 7e-26 | 121 |
|
ENSMUST00000025862
|
Smarca2-001 | protein_coding | Mus_musculus | 7e-26 | 121 |
