C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heterogeneous nuclear ribonucleoprotein A1 pseudogene 67
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000604027 HNRNPA1P67-001 ENSG00000270665 9606 + 4:72807267-72808192 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryTestisENST00000604027
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000604027 0.028±0.00 0.073±0.00 0.075±0.00 0.044±0.00 0.041±0.00 0.040±0.00 0.015±0.00 0.039±0.00 0.019±0.00 0.013±0.00 0.059±0.03 0.023±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000DC CIL_0000DC_0001 CGP 4:72280969-73069755

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000168019 Gm10052-001 processed_pseudogene Mus_musculus 0 989
ENSMUST00000087351 Hnrnpa1-202 protein_coding Mus_musculus 0 989
ENSMUST00000117081 Gm5643-001 processed_pseudogene Mus_musculus 0 972
ENSMUST00000022493 Gm5803-001 processed_pseudogene Mus_musculus 0 917
ENSMUST00000181363 Gm8652-001 processed_pseudogene Mus_musculus 0 907
ENSMUST00000129154 Hnrnpa1l2-ps-001 processed_pseudogene Mus_musculus 0 904
ENSMUST00000119097 Gm13418-001 processed_pseudogene Mus_musculus 0 776
ENSMUST00000050143 Gm7729-001 unprocessed_pseudogene Mus_musculus 0 761
ENSMUST00000036004 Hnrnpa1-201 protein_coding Mus_musculus 0 756
ENSMUST00000118970 Gm16216-001 processed_pseudogene Mus_musculus 0 739
ENSMUST00000178732 RP24-383H12.1-001 processed_pseudogene Mus_musculus 0 699
ENSMUST00000120205 Gm13297-001 processed_pseudogene Mus_musculus 0 556
ENSMUST00000122005 Gm12382-001 processed_pseudogene Mus_musculus 0 405
ENSMUST00000119387 Gm12458-001 processed_pseudogene Mus_musculus 0 363

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