C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: histone cluster 1, H2bm
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000621112 HIST1H2BM-001 ENSG00000273703 9606 + 6:27815044-27815424 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000621112
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000621112 0.066±0.00 0.072±0.00 0.247±0.00 0.165±0.00 5.270±0.00 7.320±0.00 1.153±0.00 0.249±0.00 0.706±0.00 1.333±0.96 1.943±1.84 0.168±0.07 0.313±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000UD CIL_0000UD_0005 CGP 6:27814354-27815424

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000786 NAS:IEA nucleosome
GO:0003677 NAS:IEA DNA binding
GO:0005622 IEA intracellular
GO:0005634 IDA:IEA nucleus
GO:0005654 TAS nucleoplasm
GO:0006325 TAS chromatin organization
GO:0006334 NAS nucleosome assembly
GO:0043565 IEA sequence-specific DNA binding
GO:0046982 IEA protein heterodimerization activity
GO:0070062 IDA extracellular vesicular exosome

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000051091 Hist1h2be-001 protein_coding Mus_musculus 0 466
ENSMUST00000091704 Hist1h2be-002 protein_coding Mus_musculus 0 466
ENSMUST00000018246 Hist1h2bc-001 protein_coding Mus_musculus 0 466
ENSMUST00000078156 Hist1h2bh-001 protein_coding Mus_musculus 0 466
ENSMUST00000091709 Hist1h2bn-001 protein_coding Mus_musculus 0 460
ENSMUST00000110467 Hist1h2br-001 protein_coding Mus_musculus 0 460
ENSMUST00000110469 Hist1h2bq-001 protein_coding Mus_musculus 0 460
ENSMUST00000102982 Hist1h2bp-001 protein_coding Mus_musculus 0 455
ENSMUST00000091756 Hist1h2bl-001 protein_coding Mus_musculus 0 455
ENSMUST00000079251 Hist1h2bg-001 protein_coding Mus_musculus 0 455
ENSMUST00000110476 Hist1h2bm-001 protein_coding Mus_musculus 0 455
ENSMUST00000180288 Hist1h2br-201 protein_coding Mus_musculus 0 453
ENSMUST00000091749 Hist1h2bq-201 protein_coding Mus_musculus 0 453
ENSMUST00000110455 Hist1h2bk-001 protein_coding Mus_musculus 0 451
ENSMUST00000105106 Hist1h2bf-001 protein_coding Mus_musculus 0 449
ENSMUST00000110452 Hist1h2bj-001 protein_coding Mus_musculus 0 449
ENSMUST00000110473 Hist1h2bp-002 protein_coding Mus_musculus 0 448
ENSMUST00000099703 Hist1h2bb-001 protein_coding Mus_musculus 0 444
ENSMUST00000078267 Hist3h2ba-001 protein_coding Mus_musculus 0 414
ENSMUST00000117558 Hist3h2bb-ps-001 processed_pseudogene Mus_musculus 0 405
ENSMUST00000177113 Hist2h2bb-001 protein_coding Mus_musculus 0 383
ENSMUST00000052776 Hist1h2ba-001 protein_coding Mus_musculus 0 339
ENSDART00000109316 zgc:112234-202 protein_coding Danio_rerio 0 327
ENSDART00000128030 zgc:112234-204 protein_coding Danio_rerio 0 327
ENSDART00000124016 zgc:112234-205 protein_coding Danio_rerio 0 324

Loading