C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zgc:112234
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000109316 zgc:112234-202 ENSDARG00000075482 7955 + 7:76828836-76830255 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainHeartKidneyLiverMuscleENSDART00000109316
Transcript ID Brain Heart Kidney Liver Muscle
ENSDART00000109316 0.222±0.00 0.530±0.22 0.113±0.00 0.178±0.00 0.135±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000786 IEA nucleosome
GO:0003677 IEA DNA binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005694 IEA chromosome
GO:0006334 IEA nucleosome assembly
GO:0043565 IEA sequence-specific DNA binding
GO:0046982 IEA protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000018246 Hist1h2bc-001 protein_coding Mus_musculus 0 374
ENSMUST00000051091 Hist1h2be-001 protein_coding Mus_musculus 0 379
ENSMUST00000078267 Hist3h2ba-001 protein_coding Mus_musculus 0 377
ENSMUST00000079251 Hist1h2bg-001 protein_coding Mus_musculus 0 390
ENSMUST00000090781 Hist2h2be-001 protein_coding Mus_musculus 0 327
ENSMUST00000091704 Hist1h2be-002 protein_coding Mus_musculus 0 379
ENSMUST00000091709 Hist1h2bn-001 protein_coding Mus_musculus 0 374
ENSMUST00000091749 Hist1h2bq-201 protein_coding Mus_musculus 0 372
ENSMUST00000091756 Hist1h2bl-001 protein_coding Mus_musculus 0 368
ENSMUST00000099703 Hist1h2bb-001 protein_coding Mus_musculus 0 381
ENSMUST00000102982 Hist1h2bp-001 protein_coding Mus_musculus 0 392
ENSMUST00000105106 Hist1h2bf-001 protein_coding Mus_musculus 0 379
ENSMUST00000110452 Hist1h2bj-001 protein_coding Mus_musculus 0 388
ENSMUST00000110455 Hist1h2bk-001 protein_coding Mus_musculus 0 363
ENSMUST00000110467 Hist1h2br-001 protein_coding Mus_musculus 0 375
ENSMUST00000110469 Hist1h2bq-001 protein_coding Mus_musculus 0 375
ENSMUST00000110473 Hist1h2bp-002 protein_coding Mus_musculus 0 355
ENSMUST00000110476 Hist1h2bm-001 protein_coding Mus_musculus 0 368
ENSMUST00000117558 Hist3h2bb-ps-001 processed_pseudogene Mus_musculus 0 363
ENSMUST00000117835 Gm12957-001 processed_pseudogene Mus_musculus 0 315
ENSMUST00000180288 Hist1h2br-201 protein_coding Mus_musculus 0 372
ENST00000289316 HIST1H2BD-001 protein_coding Homo_sapiens 0 357
ENST00000356530 HIST1H2BF-001 protein_coding Homo_sapiens 0 375
ENST00000356950 HIST1H2BK-001 protein_coding Homo_sapiens 0 431
ENST00000369155 HIST2H2BE-001 protein_coding Homo_sapiens 0 414
ENST00000369160 HIST2H2BE-201 protein_coding Homo_sapiens 0 412
ENST00000369167 HIST2H2BF-001 protein_coding Homo_sapiens 0 401
ENST00000377401 HIST1H2BL-001 protein_coding Homo_sapiens 0 401
ENST00000377777 HIST1H2BD-002 protein_coding Homo_sapiens 0 357
ENST00000412169 HIST2H2BA-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 374
ENST00000430394 HIST2H2BA-002 processed_transcript Homo_sapiens 0 368
ENST00000449108 HIST2H2BB-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 379
ENST00000464664 CH507-42P11.1-001 processed_pseudogene Homo_sapiens 0 422
ENST00000469483 HIST2H2BF-002 processed_transcript Homo_sapiens 0 396
ENST00000545683 HIST2H2BF-201 protein_coding Homo_sapiens 0 399
ENST00000599962 H2BFS-001 protein_coding Homo_sapiens 0 425
ENST00000609585 HIST2H2BB-002 processed_transcript Homo_sapiens 0 377
ENST00000614097 HIST1H2BE-001 protein_coding Homo_sapiens 0 372
ENST00000615966 HIST1H2BB-001 protein_coding Homo_sapiens 0 315
ENST00000621112 HIST1H2BM-001 protein_coding Homo_sapiens 0 327

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