C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00017P_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000170144-ENSG00000116044 CGP 9606 2:177212563-177392697
GeneTranscriptPositionBiotype
ENSG00000018510 (AGPS)
alkylglycerone phosphate synthase 		ENST00000264167 (AGPS-001) 177392644-177543836 protein_coding
ENST00000409888 (AGPS-002) 177392768-177538418 protein_coding
ENST00000460342 (AGPS-003) 177436984-177441469 retained_intron
ENSG00000116044 (NFE2L2)
nuclear factor, erythroid 2-like 2 		ENST00000397062 (NFE2L2-001) 177230305-177265131 protein_coding
ENST00000397063 (NFE2L2-002) 177230305-177263800 protein_coding
ENST00000421929 (NFE2L2-009) 177231851-177263800 protein_coding
ENST00000423513 (NFE2L2-006) 177232277-177263454 protein_coding
ENST00000430047 (NFE2L2-010) 177231790-177264823 protein_coding
ENST00000446151 (NFE2L2-008) 177230308-177263572 protein_coding
ENST00000448782 (NFE2L2-013) 177231714-177263567 protein_coding
ENST00000449627 (NFE2L2-012) 177230990-177263511 protein_coding
ENST00000458603 (NFE2L2-014) 177227595-177232487 protein_coding
ENST00000462023 (NFE2L2-011) 177233879-177264659 retained_intron
ENST00000464747 (NFE2L2-003) 177230308-177392697 protein_coding
ENST00000477534 (NFE2L2-007) 177233477-177263537 retained_intron
ENST00000586532 (NFE2L2-016) 177231805-177311277 protein_coding
ENST00000588123 (NFE2L2-015) 177232499-177287777 protein_coding
ENSG00000170144 (HNRNPA3)
heterogeneous nuclear ribonucleoprotein A3 		ENST00000392524 (HNRNPA3-001) 177212563-177220085 protein_coding
ENST00000411529 (HNRNPA3-002) 177212749-177223958 protein_coding
ENST00000432457 (HNRNPA3-008) 177216526-177219687 protein_coding
ENST00000435711 (HNRNPA3-014) 177212772-177219865 protein_coding
ENST00000483137 (HNRNPA3-012) 177219093-177219806 retained_intron
ENSG00000225808 (DNAJC19P5)
DnaJ (Hsp40) homolog, subfamily C, member 19 pseudogene 5 		ENST00000443295 (DNAJC19P5-001) 177229191-177229506 processed_pseudogene
ENSG00000237178 (AC019080.1)
 ENST00000453859 (AC019080.1-001) 177344443-177344836 processed_pseudogene
ENSG00000238295 (snoU13)
Small nucleolar RNA U13 		ENST00000459157 (snoU13.1-201) 177345858-177345961 snoRNA
ENSG00000265396 (MIR3128)
microRNA 3128 		ENST00000581957 (MIR3128-201) 177255945-177256010 miRNA
ENSG00000271825 (RP11-337N6.2)
 ENST00000606180 (RP11-337N6.2-001) 177300600-177302006 antisense
ENSG00000271996 (RP11-337N6.1)
 ENST00000606200 (RP11-337N6.1-001) 177306373-177310572 antisense
ENSG00000280374 (RP11-337N6.3)
 ENST00000624891 (RP11-337N6.3-001) 177317715-177318471 sense_intronic

Homo sapiens Ensembl (GRCh38)

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CIL_00017P_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000059005-ENSMUSG00000015839 CGP 10090 2:75659261-75704641
GeneTranscriptPositionBiotype
ENSMUSG00000015839 (Nfe2l2)
nuclear factor, erythroid derived 2, like 2 		ENSMUST00000102672 (Nfe2l2-001) 75675513-75704641 protein_coding
ENSMUST00000152371 (Nfe2l2-002) 75691052-75704489 processed_transcript
ENSMUSG00000059005 (Hnrnpa3)
heterogeneous nuclear ribonucleoprotein A3 		ENSMUST00000090792 (Hnrnpa3-201) 75659318-75665286 protein_coding
ENSMUST00000111961 (Hnrnpa3-003) 75659280-75666121 protein_coding
ENSMUST00000111962 (Hnrnpa3-001) 75659267-75669407 protein_coding
ENSMUST00000111964 (Hnrnpa3-002) 75659261-75665839 protein_coding
ENSMUST00000132392 (Hnrnpa3-005) 75659280-75662033 retained_intron
ENSMUST00000141974 (Hnrnpa3-004) 75662489-75665455 protein_coding
ENSMUST00000164947 (Hnrnpa3-202) 75659318-75665286 protein_coding
ENSMUSG00000089015 (Gm24996)
predicted gene, 24996 		ENSMUST00000158390 (Gm24996-201) 75686740-75686838 snRNA

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestis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
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00017P_0001ENSG00000018510ENST00000264167ENSG00000116044ENST00000397062ENST00000397063ENST00000446151ENST00000449627ENSG00000170144ENST00000392524ENST00000411529ENST00000432457ENST00000435711ENSG00000225808ENST00000443295ENSG00000237178ENST00000453859ENSG00000238295ENST00000459157ENSG00000265396ENST00000581957ENSG00000271825ENST00000606180ENSG00000271996ENST00000606200ENSG00000280374ENST00000624891CIL_00017P_0002ENSMUSG00000015839ENSMUST00000102672ENSMUSG00000059005ENSMUST00000090792ENSMUST00000111961ENSMUST00000111962ENSMUST00000111964ENSMUST00000132392ENSMUST00000141974ENSMUST00000164947ENSMUSG00000089015ENSMUST00000158390
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000018510 ENST00000264167 5.859±0.00 3.802±0.00 2.884±0.00 3.083±0.62 3.971±1.99 6.287±0.82 2.707±0.31 4.347±0.82 4.572±1.97 2.517±0.00 1.894±1.15 5.887±2.08 3.951±0.96 4.685±0.95
ENST00000409888 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000460342 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000116044 ENST00000397062 15.151±0.00 11.877±0.00 4.626±0.00 10.934±0.00 N/A 4.474±0.00 13.006±0.00 18.022±11.26 10.055±5.42 17.280±12.95 3.825±1.78 23.486±17.53 15.465±6.34 21.092±4.40
ENST00000397063 11.019±0.00 N/A N/A 6.657±1.58 3.461±0.00 3.922±0.00 3.945±0.00 16.002±0.00 5.704±0.00 11.191±0.00 N/A 17.034±6.38 N/A 12.108±0.00
ENST00000421929 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000423513 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000430047 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000446151 N/A N/A N/A N/A N/A N/A 4.044±0.00 N/A N/A N/A 0.952±0.00 N/A N/A N/A
ENST00000448782 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000449627 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 23.151±0.00 29.337±0.00 26.768±0.00
ENST00000458603 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000462023 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000464747 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000477534 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000586532 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000588123 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000170144 ENST00000392524 22.445±0.00 24.017±0.00 N/A N/A 10.531±0.00 20.854±0.00 5.891±0.00 22.156±0.00 6.501±0.00 16.863±0.00 8.753±0.00 36.193±8.73 44.346±13.57 49.961±18.18
ENST00000411529 17.455±0.00 29.113±0.00 N/A 14.854±8.54 12.780±1.54 16.477±4.85 3.749±3.08 11.712±6.46 7.914±0.74 15.732±10.03 4.278±2.12 19.565±10.00 11.094±1.16 13.409±4.81
ENST00000432457 82.380±0.00 118.707±0.00 N/A 88.167±0.00 52.458±0.00 92.659±0.00 19.360±0.00 79.935±0.00 22.794±0.00 73.367±0.00 24.904±0.00 115.577±34.41 82.569±32.29 147.566±0.93
ENST00000435711 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 12.798±0.00 N/A
ENST00000483137 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000225808 ENST00000443295 1.349±0.00 N/A 0.986±0.00 1.176±0.59 0.844±0.07 1.644±1.49 0.803±0.72 1.635±0.11 1.759±1.61 4.204±0.38 0.726±0.00 1.982±1.24 0.254±0.09 0.536±0.08
ENSG00000237178 ENST00000453859 N/A 0.164±0.00 N/A 0.666±0.00 1.468±0.00 N/A N/A 0.393±0.00 N/A N/A N/A N/A 0.168±0.00 N/A
ENSG00000238295 ENST00000459157 N/A 0.840±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000265396 ENST00000581957 N/A N/A N/A N/A N/A N/A 0.431±0.00 N/A N/A N/A N/A N/A N/A N/A
ENSG00000271825 ENST00000606180 0.216±0.00 0.752±0.00 5.014±0.00 0.679±0.00 0.425±0.00 0.385±0.00 0.072±0.00 0.215±0.00 0.021±0.00 0.078±0.00 N/A 0.129±0.00 0.274±0.13 0.434±0.00
ENSG00000271996 ENST00000606200 0.069±0.00 0.223±0.00 N/A 0.330±0.00 0.301±0.00 0.631±0.00 0.284±0.22 0.419±0.00 0.342±0.00 0.074±0.00 0.020±0.00 0.193±0.03 0.079±0.00 0.083±0.00
ENSG00000280374 ENST00000624891 0.306±0.00 0.191±0.00 N/A 0.100±0.05 0.626±0.00 0.124±0.00 0.091±0.05 0.340±0.00 0.158±0.03 0.430±0.15 N/A 0.420±0.36 0.420±0.12 0.289±0.08
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000015839 ENSMUST00000102672 27.187±7.68 37.009±1.87 75.799±5.16 4.052±0.35 29.515±5.34 50.956±5.48 17.719±1.10 30.162±3.45 24.965±3.95 46.926±7.86 11.254±0.95 49.103±7.39 22.729±4.11 6.558±1.34
ENSMUST00000152371 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000059005 ENSMUST00000090792 N/A 5.242±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 14.330±2.38 12.451±2.17 N/A N/A
ENSMUST00000111961 N/A N/A N/A 15.545±0.00 N/A N/A N/A N/A 52.690±8.43 N/A 7.658±1.56 48.538±17.56 70.245±50.56 25.850±0.00
ENSMUST00000111962 16.476±6.44 9.268±1.92 42.934±5.17 55.002±31.78 13.689±1.38 8.815±1.67 10.655±0.31 14.315±1.94 33.074±22.91 25.678±2.00 10.506±0.89 16.376±10.26 23.170±11.97 5.350±1.78
ENSMUST00000111964 N/A N/A N/A 66.598±0.00 N/A N/A N/A N/A 107.274±48.50 N/A 7.260±0.00 8.310±0.00 49.836±0.00 49.046±50.87
ENSMUST00000132392 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 5.752±0.00 N/A N/A
ENSMUST00000141974 N/A N/A N/A 95.327±0.00 N/A N/A N/A N/A N/A N/A N/A 451.437±0.00 389.818±230.44 857.296±0.00
ENSMUST00000164947 N/A 5.199±0.46 68.893±5.54 119.825±0.00 N/A 7.211±0.00 N/A 17.901±0.73 116.094±110.85 19.262±0.00 16.089±3.21 67.252±65.38 180.580±56.96 22.198±2.92
ENSMUSG00000089015 ENSMUST00000158390 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 131.312±0.00 N/A

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