C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heterogeneous nuclear ribonucleoprotein A3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000432457 HNRNPA3-008 ENSG00000170144 9606 + 2:177216526-177219687 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000432457
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000432457 82.380±0.00 118.707±0.00 88.167±0.00 52.458±0.00 92.659±0.00 19.360±0.00 79.935±0.00 22.794±0.00 73.367±0.00 24.904±0.00 115.577±34.41 82.569±32.29 147.566±0.93

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007L2 CIL_0007L2_0001 UCNEbase 2:175103181-177219808
CIL_00017S CIL_00017S_0001 CGP 2:176269395-177223958
CIL_00017P CIL_00017P_0001 CGP 2:177212563-177392697

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000091130 Gm5641-201 protein_coding Mus_musculus 0 795
ENSMUST00000071732 Gm6793-201 protein_coding Mus_musculus 0 795
ENSMUST00000111961 Hnrnpa3-003 protein_coding Mus_musculus 0 795
ENSMUST00000111962 Hnrnpa3-001 protein_coding Mus_musculus 0 795
ENSMUST00000111964 Hnrnpa3-002 protein_coding Mus_musculus 0 795
ENSMUST00000185178 Gm17190-002 protein_coding Mus_musculus 0 385
ENSMUST00000119442 Gm13369-001 processed_pseudogene Mus_musculus 0 270
ENSMUST00000119765 Gm9431-001 processed_pseudogene Mus_musculus 0 263
ENSMUST00000119775 Gm6506-001 processed_pseudogene Mus_musculus 0 243
ENSMUST00000117582 Gm5940-001 processed_pseudogene Mus_musculus 0 230
ENSMUST00000120017 Gm12960-001 processed_pseudogene Mus_musculus 0 230
ENSMUST00000161973 Gm6397-001 processed_pseudogene Mus_musculus 0 230
ENSMUST00000119652 Gm11991-001 processed_pseudogene Mus_musculus 0 230
ENSMUST00000121942 Gm6161-001 processed_pseudogene Mus_musculus 0 230
ENSMUST00000089593 Gm7551-201 processed_pseudogene Mus_musculus 0 230
ENSMUST00000177820 Gm9242-201 protein_coding Mus_musculus 0 230
ENSMUST00000073014 Gm8991-201 protein_coding Mus_musculus 0 230
ENSMUST00000090792 Hnrnpa3-201 protein_coding Mus_musculus 0 230
ENSMUST00000164947 Hnrnpa3-202 protein_coding Mus_musculus 0 230
ENSMUST00000141974 Hnrnpa3-004 protein_coding Mus_musculus 0 230
ENSMUST00000168178 Gm6254-001 processed_pseudogene Mus_musculus 0 224
ENSMUST00000117287 Gm14398-001 processed_pseudogene Mus_musculus 0 220
ENSMUST00000122378 Gm14730-001 processed_pseudogene Mus_musculus 0 220
ENSMUST00000166043 Gm17082-001 processed_pseudogene Mus_musculus 0 215
ENSMUST00000032395 Gm7399-001 processed_pseudogene Mus_musculus 0 207
ENSMUST00000172004 Gm6153-001 processed_pseudogene Mus_musculus 0 206
ENSMUST00000120104 Gm12129-001 processed_pseudogene Mus_musculus 0 200
ENSMUST00000125165 Gm11847-001 processed_pseudogene Mus_musculus 0 200
ENSMUST00000184369 Gm17190-001 translated_processed_pseudogene Mus_musculus 0 198
ENSMUST00000191574 RP24-177N20.1-001 processed_pseudogene Mus_musculus 0 191
ENSMUST00000119643 Gm6758-001 processed_pseudogene Mus_musculus 4.2039e-45 185
ENSMUST00000119037 Gm12986-001 processed_pseudogene Mus_musculus 5e-39 165
ENSMUST00000189662 RP23-472J11.2-001 processed_pseudogene Mus_musculus 2e-37 159
ENSMUST00000117573 Gm15678-001 processed_pseudogene Mus_musculus 3e-36 156
ENSMUST00000167880 Sbf2-006 retained_intron Mus_musculus 0.00000000000005 82
ENSMUST00000120487 Gm12229-001 processed_pseudogene Mus_musculus 0.000000001 68
ENSMUST00000121434 Gm14052-001 processed_pseudogene Mus_musculus 0 244

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