C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heterogeneous nuclear ribonucleoprotein A3
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000111964 Hnrnpa3-002 ENSMUSG00000059005 10090 + 2:75659261-75665839 protein_coding

Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverMuscleOvaryPlacentaTestisENSMUST00000111964
Transcript ID Brain Liver Muscle Ovary Placenta Testis
ENSMUST00000111964 66.598±0.00 107.274±48.50 7.260±0.00 8.310±0.00 49.836±0.00 49.046±50.87

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007L2 CIL_0007L2_0002 UCNEbase 2:73834549-75665799
CIL_00017S CIL_00017S_0002 CGP 2:74825803-75669407
CIL_00017P CIL_00017P_0002 CGP 2:75659261-75704641

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000166 IEA nucleotide binding
GO:0006397 IEA mRNA processing
GO:0008380 IEA RNA splicing

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000392524 HNRNPA3-001 protein_coding Homo_sapiens 0 2691
ENST00000401429 HNRNPA3P1-001 processed_pseudogene Homo_sapiens 0 1605
ENST00000411529 HNRNPA3-002 protein_coding Homo_sapiens 0 2471
ENST00000416838 HNRNPA3P3-001 processed_pseudogene Homo_sapiens 0 1572
ENST00000424470 HNRNPA3P15-001 processed_pseudogene Homo_sapiens 0 1096
ENST00000424736 RP11-512F24.1-001 processed_pseudogene Homo_sapiens 0 989
ENST00000427514 HNRNPA3P4-001 processed_pseudogene Homo_sapiens 0 1005
ENST00000432457 HNRNPA3-008 protein_coding Homo_sapiens 0 795
ENST00000435711 HNRNPA3-014 protein_coding Homo_sapiens 0 1829
ENST00000437410 HNRNPA3P12-001 processed_pseudogene Homo_sapiens 0 1426
ENST00000441511 AC012513.4-001 processed_pseudogene Homo_sapiens 0 1077
ENST00000444546 HNRNPA3P14-001 processed_pseudogene Homo_sapiens 0 717
ENST00000451198 HNRNPA3P2-001 unprocessed_pseudogene Homo_sapiens 0 462
ENST00000455201 HNRNPA3P5-001 processed_pseudogene Homo_sapiens 0 1227
ENST00000472163 HNRNPA3P6-001 processed_pseudogene Homo_sapiens 0 979
ENST00000483137 HNRNPA3-012 retained_intron Homo_sapiens 0 739
ENST00000507583 RP11-395I6.1-001 processed_pseudogene Homo_sapiens 6.99949e-42 172
ENST00000512222 HNRNPA3P13-001 processed_pseudogene Homo_sapiens 0 1314
ENST00000547726 HNRNPA3P10-001 processed_pseudogene Homo_sapiens 0 1548
ENST00000564298 HNRNPA3P11-001 processed_pseudogene Homo_sapiens 0 1024
ENST00000591842 HNRNPA3P16-001 processed_pseudogene Homo_sapiens 0 778
ENST00000604913 HNRNPA3P9-001 processed_pseudogene Homo_sapiens 0 736
ENST00000619693 CTD-3093M3.1-001 unprocessed_pseudogene Homo_sapiens 7e-24 111

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