Institute of Cardiovascular Regeneration Webtool Repository

C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Accession	Transcript Name	Contained in Gene	Tax ID	Strand	Position	Biotype
Transcript Info
Description:	ribosomal protein L12 pseudogene 37
ENST00000486874	RPL12P37-001	ENSG00000240270	9606	+	17:80976454-80976948	processed_pseudogene

Expression Patterns

Transcript ID	Adipose	Adrenal	Brain	Colon	Heart	Kidney	Liver	Lung	Muscle	Ovary	Testis
ENST00000486874	0.214±0.00	0.347±0.00	0.165±0.00	0.181±0.00	0.034±0.00	0.118±0.00	0.034±0.00	0.336±0.00	0.523±0.00	0.068±0.00	0.171±0.00

Conserved Regions
Region ID	Sub-Region	Region Type	Position
CIL_00042G	CIL_00042G_0001	CGP	17:80544819-81009517

Gene Ontology
GO ID	Evidence Type	GO Description
No GO terms available.

Homologs
ENSEMBL Accession	Gene Name	Biotype	Species	E-Value	Bit Score
ENSMUST00000092620	Gm10275-002	processed_transcript	Mus_musculus	0	492
ENSMUST00000126610	Rpl12-001	protein_coding	Mus_musculus	0	492
ENSMUST00000168697	Gm10275-001	transcribed_processed_pseudogene	Mus_musculus	0	486
ENSMUST00000119608	Gm11425-001	processed_pseudogene	Mus_musculus	0	475
ENSMUST00000121857	Gm15793-001	processed_pseudogene	Mus_musculus	0	475
ENSMUST00000076703	Gm9396-001	protein_coding	Mus_musculus	0	475
ENSMUST00000102811	Rpl12-002	processed_transcript	Mus_musculus	0	468
ENSMUST00000116168	Rpl12-ps1-001	processed_pseudogene	Mus_musculus	0	459
ENSMUST00000122012	Gm6285-001	processed_pseudogene	Mus_musculus	0	431
ENSMUST00000071515	Gm7117-001	processed_pseudogene	Mus_musculus	0	392
ENSMUST00000172474	Gm20430-001	processed_pseudogene	Mus_musculus	0	217
ENSMUST00000117322	Gm12038-001	processed_pseudogene	Mus_musculus	9.80909e-45	183
ENSMUST00000154340	Rpl12-003	processed_transcript	Mus_musculus	2e-31	139
ENSMUST00000134912	Rpl12-007	processed_transcript	Mus_musculus	5e-28	128
ENSMUST00000121669	Gm11745-001	processed_pseudogene	Mus_musculus	4e-24	115

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