C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L12 pseudogene 37
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000486874 RPL12P37-001 ENSG00000240270 9606 + 17:80976454-80976948 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonHeartKidneyLiverLungMuscleOvaryTestisENST00000486874
Transcript ID Adipose Adrenal Brain Colon Heart Kidney Liver Lung Muscle Ovary Testis
ENST00000486874 0.214±0.00 0.347±0.00 0.165±0.00 0.181±0.00 0.034±0.00 0.118±0.00 0.034±0.00 0.336±0.00 0.523±0.00 0.068±0.00 0.171±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00042G CIL_00042G_0001 CGP 17:80544819-81009517

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000092620 Gm10275-002 processed_transcript Mus_musculus 0 492
ENSMUST00000126610 Rpl12-001 protein_coding Mus_musculus 0 492
ENSMUST00000168697 Gm10275-001 transcribed_processed_pseudogene Mus_musculus 0 486
ENSMUST00000119608 Gm11425-001 processed_pseudogene Mus_musculus 0 475
ENSMUST00000121857 Gm15793-001 processed_pseudogene Mus_musculus 0 475
ENSMUST00000076703 Gm9396-001 protein_coding Mus_musculus 0 475
ENSMUST00000102811 Rpl12-002 processed_transcript Mus_musculus 0 468
ENSMUST00000116168 Rpl12-ps1-001 processed_pseudogene Mus_musculus 0 459
ENSMUST00000122012 Gm6285-001 processed_pseudogene Mus_musculus 0 431
ENSMUST00000071515 Gm7117-001 processed_pseudogene Mus_musculus 0 392
ENSMUST00000172474 Gm20430-001 processed_pseudogene Mus_musculus 0 217
ENSMUST00000117322 Gm12038-001 processed_pseudogene Mus_musculus 9.80909e-45 183
ENSMUST00000154340 Rpl12-003 processed_transcript Mus_musculus 2e-31 139
ENSMUST00000134912 Rpl12-007 processed_transcript Mus_musculus 5e-28 128
ENSMUST00000121669 Gm11745-001 processed_pseudogene Mus_musculus 4e-24 115

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