C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00056Y_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSG00000163882-ENSG00000090534 CGP 9606 3:184361718-184378144
GeneTranscriptPositionBiotype
ENSG00000090534 (THPO)
thrombopoietin 		ENST00000204615 (THPO-001) 184371935-184378144 protein_coding
ENST00000421442 (THPO-003) 184372327-184376259 protein_coding
ENST00000445696 (THPO-002) 184372269-184378140 protein_coding
ENST00000477594 (THPO-004) 184372898-184373437 processed_transcript
CIL_00056Y_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
ENSMUSG00000021018-ENSMUSG00000022847 CGP 10090 16:20717665-20734511
GeneTranscriptPositionBiotype
ENSMUSG00000006958 (Chrd)
chordin 		ENSMUST00000007171 (Chrd-001) 20733127-20742384 protein_coding
ENSMUST00000115423 (Chrd-002) 20733127-20738152 protein_coding
ENSMUST00000151150 (Chrd-004) 20736206-20742382 retained_intron
ENSMUST00000153299 (Chrd-003) 20733127-20742384 nonsense_mediated_decay
ENSMUSG00000021018 (Polr2h)
polymerase (RNA) II (DNA directed) polypeptide H 		ENSMUST00000021405 (Polr2h-001) 20717665-20722267 protein_coding
ENSMUST00000161038 (Polr2h-002) 20718172-20722007 processed_transcript
ENSMUSG00000022843 (Clcn2)
chloride channel 2 		ENSMUST00000007207 (Clcn2-001) 20702964-20716117 protein_coding
ENSMUST00000120099 (Clcn2-005) 20703223-20716111 protein_coding
ENSMUST00000123417 (Clcn2-009) 20707706-20708734 retained_intron
ENSMUST00000131522 (Clcn2-002) 20705538-20717746 nonsense_mediated_decay
ENSMUST00000131833 (Clcn2-007) 20710091-20711965 retained_intron
ENSMUST00000132512 (Clcn2-006) 20712311-20713668 retained_intron
ENSMUST00000144400 (Clcn2-008) 20707174-20709126 retained_intron
ENSMUST00000148131 (Clcn2-003) 20702988-20716114 retained_intron
ENSMUST00000153075 (Clcn2-004) 20702998-20716164 retained_intron
ENSMUSG00000022847 (Thpo)
thrombopoietin 		ENSMUST00000076422 (Thpo-002) 20725158-20730627 protein_coding
ENSMUST00000115437 (Thpo-001) 20725158-20734511 protein_coding

Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00056Y_0001ENSG00000090534ENST00000204615ENST00000421442ENST00000445696ENST00000477594CIL_00056Y_0002ENSMUSG00000006958ENSMUST00000007171ENSMUST00000115423ENSMUST00000151150ENSMUST00000153299ENSMUSG00000021018ENSMUST00000021405ENSMUST00000161038ENSMUSG00000022843ENSMUST00000007207ENSMUST00000120099ENSMUST00000123417ENSMUST00000131522ENSMUST00000131833ENSMUST00000132512ENSMUST00000144400ENSMUST00000148131ENSMUST00000153075ENSMUSG00000022847ENSMUST00000076422ENSMUST00000115437
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00056Y_0001ENSG00000090534ENST00000204615ENST00000421442ENST00000445696CIL_00056Y_0002ENSMUSG00000006958ENSMUST00000007171ENSMUST00000115423ENSMUST00000151150ENSMUST00000153299ENSMUSG00000021018ENSMUST00000021405ENSMUSG00000022843ENSMUST00000007207ENSMUST00000144400ENSMUST00000148131ENSMUST00000153075ENSMUSG00000022847ENSMUST00000076422ENSMUST00000115437
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000090534 ENST00000204615 N/A N/A 0.152±0.00 N/A 0.225±0.00 0.248±0.00 N/A 0.218±0.00 1.557±0.00 N/A N/A 0.159±0.00 N/A N/A
ENST00000421442 0.411±0.00 0.600±0.00 N/A 0.515±0.37 0.568±0.00 N/A 0.141±0.00 1.461±0.00 4.893±0.00 0.206±0.00 N/A 0.523±0.31 0.322±0.08 1.247±0.00
ENST00000445696 0.163±0.00 0.112±0.00 N/A 0.509±0.00 0.228±0.00 N/A N/A 0.498±0.00 5.605±0.00 0.141±0.00 0.070±0.00 0.299±0.15 0.088±0.00 0.597±0.33
ENST00000477594 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000006958 ENSMUST00000007171 6.527±1.87 14.666±2.78 7.425±0.46 5.207±2.46 4.532±1.29 3.699±0.53 0.504±0.20 2.623±0.79 2.181±1.47 1.537±0.28 1.291±0.26 3.705±1.84 0.894±0.25 0.428±0.17
ENSMUST00000115423 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.361±0.00
ENSMUST00000151150 N/A N/A N/A 1.142±0.25 0.289±0.00 N/A N/A N/A N/A N/A N/A N/A 0.118±0.00 0.061±0.05
ENSMUST00000153299 1.613±0.00 3.089±0.81 1.844±0.00 1.616±0.16 N/A 0.789±0.06 0.261±0.11 N/A N/A N/A 0.560±0.00 0.862±0.00 N/A 0.139±0.01
ENSMUSG00000021018 ENSMUST00000021405 12.537±4.95 N/A 20.804±0.01 26.738±2.54 11.292±0.65 N/A N/A 11.846±0.94 27.415±9.32 8.207±0.38 N/A 30.928±4.07 32.448±23.41 N/A
ENSMUST00000161038 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUSG00000022843 ENSMUST00000007207 2.335±1.44 56.273±4.66 N/A 11.321±0.91 2.093±0.15 72.776±7.27 2.077±0.00 6.489±1.16 12.504±7.74 1.635±0.19 N/A 8.967±3.45 2.902±0.88 8.741±0.70
ENSMUST00000120099 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000123417 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131522 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000131833 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000132512 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000144400 N/A N/A N/A N/A 7.755±0.00 N/A N/A N/A N/A N/A N/A 19.582±2.89 N/A N/A
ENSMUST00000148131 2.678±0.00 N/A N/A 4.210±0.00 N/A N/A N/A N/A N/A N/A N/A 5.933±1.50 N/A N/A
ENSMUST00000153075 5.017±3.07 32.112±6.39 3.372±0.16 9.027±0.28 2.978±0.94 36.666±8.32 N/A 3.193±1.42 5.291±1.44 1.529±0.24 N/A 12.612±4.62 2.533±0.92 15.521±1.18
ENSMUSG00000022847 ENSMUST00000076422 2.286±0.27 6.642±0.75 N/A N/A 2.617±0.36 2.488±0.66 0.326±0.00 5.490±1.05 6.261±3.74 0.629±0.17 2.613±0.50 0.917±0.05 1.590±1.09 N/A
ENSMUST00000115437 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.221±0.00

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