C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein L7a
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000496554 RPL7A-002 ENSG00000148303 9606 + 9:133348218-133350695 processed_transcript

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006DH CIL_0006DH_0001 CGP 9:133338323-133351426
CIL_0006DK CIL_0006DK_0001 CGP 9:133348214-133356676

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000085365 Gm16477-001 processed_pseudogene Mus_musculus 0 702
ENSMUST00000118791 Rpl7a-ps11-001 processed_pseudogene Mus_musculus 0 697
ENSMUST00000190511 RP23-58N8.1-001 processed_pseudogene Mus_musculus 0 697
ENSMUST00000137376 Rpl7a-004 processed_transcript Mus_musculus 0 691
ENSMUST00000102898 Rpl7a-001 protein_coding Mus_musculus 0 691
ENSMUST00000090170 Rpl7a-ps3-201 protein_coding Mus_musculus 0 686
ENSMUST00000190579 Rpl7a-ps10-001 processed_pseudogene Mus_musculus 0 675
ENSMUST00000183380 Gm17828-001 processed_pseudogene Mus_musculus 0 669
ENSMUST00000136269 Rpl7a-002 processed_transcript Mus_musculus 0 665
ENSMUST00000071172 RP23-58N8.4-001 processed_pseudogene Mus_musculus 0 652
ENSMUST00000096427 Gm17415-001 processed_pseudogene Mus_musculus 0 652
ENSMUST00000095218 Rpl7a-ps5-201 protein_coding Mus_musculus 0 652
ENSMUST00000145247 Gm6286-001 processed_pseudogene Mus_musculus 0 630
ENSMUST00000191231 RP24-217I2.2-001 processed_pseudogene Mus_musculus 0 628
ENSMUST00000162120 Gm7418-001 processed_pseudogene Mus_musculus 0 625
ENSMUST00000119745 Gm13864-001 processed_pseudogene Mus_musculus 0 610
ENSMUST00000118838 Gm11362-001 processed_pseudogene Mus_musculus 0 603
ENSMUST00000120384 Rpl7a-ps12-001 processed_pseudogene Mus_musculus 0 595
ENSMUST00000122355 Gm11760-001 processed_pseudogene Mus_musculus 0 590
ENSMUST00000117398 Gm8250-001 processed_pseudogene Mus_musculus 0 584
ENSMUST00000120032 Gm13666-001 processed_pseudogene Mus_musculus 0 580
ENSMUST00000151645 Gm7847-001 processed_pseudogene Mus_musculus 0 566
ENSMUST00000121538 Gm14156-001 processed_pseudogene Mus_musculus 0 555
ENSMUST00000171235 Gm5459-001 processed_pseudogene Mus_musculus 0 553
ENSMUST00000120504 Gm12124-001 processed_pseudogene Mus_musculus 0 538
ENSMUST00000143678 Rpl7a-003 processed_transcript Mus_musculus 0 501
ENSMUST00000117289 Gm16394-001 processed_pseudogene Mus_musculus 0 351
ENSMUST00000119982 Gm15007-001 processed_pseudogene Mus_musculus 0.00000000000008 82

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