C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Region Summary
CIL_00099C_0001 (Click to Hide/Show)
Source ID Type Tax ID Position
hs771 VISTA 9606 10:123048803-123649878
GeneTranscriptPositionBiotype
ENSG00000154473 (BUB3)
BUB3 mitotic checkpoint protein 		ENST00000368858 (BUB3-002) 123154415-123165365 protein_coding
ENST00000368859 (BUB3-004) 123154402-123165212 protein_coding
ENST00000368865 (BUB3-001) 123154277-123170467 protein_coding
ENST00000407911 (BUB3-005) 123154859-123162693 protein_coding
ENST00000481952 (BUB3-006) 123162254-123163241 processed_transcript
ENSG00000188620 (HMX3)
H6 family homeobox 3 		ENST00000357878 (HMX3-001) 123135962-123137741 protein_coding
ENSG00000188816 (HMX2)
H6 family homeobox 2 		ENST00000339992 (HMX2-001) 123148122-123150672 protein_coding
ENSG00000196177 (ACADSB)
acyl-CoA dehydrogenase, short/branched chain 		ENST00000358776 (ACADSB-001) 123009016-123058311 protein_coding
ENST00000368869 (ACADSB-004) 123008979-123054119 protein_coding
ENST00000411816 (ACADSB-002) 123027534-123040657 protein_coding
ENST00000496730 (ACADSB-003) 123034355-123047249 processed_transcript
ENST00000541070 (ACADSB-005) 123052761-123053878 retained_intron
ENSG00000225152 (RP11-338O1.2)
 ENST00000415509 (RP11-338O1.2-001) 123425713-123427640 lincRNA
ENSG00000227586 (RP11-162A23.5)
 ENST00000469206 (RP11-162A23.5-001) 123171535-123171875 processed_pseudogene
ENSG00000230131 (RP11-282I1.1)
 ENST00000448347 (RP11-282I1.1-001) 123356450-123517708 lincRNA
ENST00000448671 (RP11-282I1.1-002) 123449353-123489336 lincRNA
ENSG00000234542 (RP11-282I1.2)
 ENST00000451295 (RP11-282I1.2-001) 123574227-123583767 lincRNA

Homo sapiens Ensembl (GRCh38)

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CIL_00099C_0002 (Click to Hide/Show)
Source ID Type Tax ID Position
hs771 VISTA 10090 7:131412593-132013659
GeneTranscriptPositionBiotype
ENSMUSG00000030861 (Acadsb)
acyl-Coenzyme A dehydrogenase, short/branched chain 		ENSMUST00000015829 (Acadsb-001) 131410601-131446211 protein_coding
ENSMUST00000117518 (Acadsb-003) 131410703-131444763 protein_coding
ENSMUST00000133277 (Acadsb-005) 131424472-131428790 retained_intron
ENSMUST00000135633 (Acadsb-004) 131424437-131429990 retained_intron
ENSMUST00000136612 (Acadsb-007) 131434246-131437519 retained_intron
ENSMUST00000151995 (Acadsb-006) 131428584-131432142 retained_intron
ENSMUST00000156261 (Acadsb-002) 131429811-131446209 retained_intron
ENSMUSG00000040125 (Gpr26)
G protein-coupled receptor 26 		ENSMUST00000045840 (Gpr26-001) 131966460-131994405 protein_coding
ENSMUSG00000040148 (Hmx3)
H6 homeobox 3 		ENSMUST00000046093 (Hmx3-001) 131542867-131544925 protein_coding
ENSMUSG00000050100 (Hmx2)
H6 homeobox 2 		ENSMUST00000051997 (Hmx2-001) 131554061-131556589 protein_coding
ENSMUST00000183219 (Hmx2-002) 131548773-131556589 protein_coding
ENSMUSG00000062758 (Gm16477)
predicted pseudogene 16477 		ENSMUST00000085365 (Gm16477-001) 131614188-131614988 processed_pseudogene
ENSMUSG00000066979 (Bub3)
budding uninhibited by benzimidazoles 3 homolog (S. cerevisiae) 		ENSMUST00000084502 (Bub3-201) 131560391-131571898 protein_coding

Mus musculus Ensembl (GRCm38)

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Expression Patterns

Heat Map
Heat Map (Expressed Only)
Numeric Values
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00099C_0001ENSG00000154473ENST00000368858ENST00000368859ENST00000368865ENST00000407911ENST00000481952ENSG00000188620ENST00000357878ENSG00000188816ENST00000339992ENSG00000196177ENST00000358776ENST00000368869ENST00000411816ENST00000496730ENST00000541070ENSG00000225152ENST00000415509ENSG00000227586ENST00000469206ENSG00000230131ENST00000448347ENST00000448671ENSG00000234542ENST00000451295CIL_00099C_0002ENSMUSG00000030861ENSMUST00000015829ENSMUST00000117518ENSMUST00000133277ENSMUST00000135633ENSMUST00000136612ENSMUST00000151995ENSMUST00000156261ENSMUSG00000040125ENSMUST00000045840ENSMUSG00000040148ENSMUST00000046093ENSMUSG00000050100ENSMUST00000051997ENSMUST00000183219ENSMUSG00000062758ENSMUST00000085365ENSMUSG00000066979ENSMUST00000084502
Region; Gene Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisCIL_00099C_0001ENSG00000154473ENST00000368858ENST00000368865ENST00000407911ENST00000481952ENSG00000188620ENST00000357878ENSG00000188816ENST00000339992ENSG00000196177ENST00000358776ENST00000368869ENSG00000225152ENST00000415509ENSG00000227586ENST00000469206ENSG00000230131ENST00000448347ENST00000448671ENSG00000234542ENST00000451295CIL_00099C_0002ENSMUSG00000030861ENSMUST00000015829ENSMUST00000117518ENSMUST00000135633ENSMUST00000136612ENSMUST00000156261ENSMUSG00000040125ENSMUST00000045840ENSMUSG00000040148ENSMUST00000046093ENSMUSG00000050100ENSMUST00000051997ENSMUST00000183219ENSMUSG00000062758ENSMUST00000085365ENSMUSG00000066979ENSMUST00000084502
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSG00000154473 ENST00000368858 13.436±0.00 20.594±0.00 N/A 9.615±5.06 8.361±4.76 9.476±6.07 8.212±0.00 11.929±8.85 4.910±2.60 7.533±3.51 10.978±0.00 18.295±8.24 15.981±1.92 25.144±9.91
ENST00000368859 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000368865 1.937±0.00 N/A 0.412±0.00 1.853±1.55 1.804±0.27 1.500±0.29 0.928±0.00 1.456±1.14 0.315±0.00 N/A 0.577±0.45 3.576±2.35 1.730±0.45 2.370±0.05
ENST00000407911 N/A N/A 2.208±0.00 N/A N/A N/A N/A N/A N/A 7.536±0.00 3.272±0.00 13.819±0.00 N/A 21.597±0.00
ENST00000481952 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.744±0.00 N/A N/A N/A
ENSG00000188620 ENST00000357878 0.136±0.00 N/A N/A N/A N/A 0.112±0.00 0.053±0.00 0.319±0.00 N/A 0.060±0.00 0.277±0.00 N/A N/A 0.096±0.00
ENSG00000188816 ENST00000339992 N/A N/A 0.088±0.00 N/A N/A 0.085±0.00 N/A 2.400±0.00 N/A 0.017±0.00 N/A N/A N/A 0.074±0.02
ENSG00000196177 ENST00000358776 1.835±0.00 1.446±0.00 8.815±0.00 3.127±1.57 2.836±1.34 1.778±0.27 6.652±5.43 32.649±27.44 21.512±19.67 0.463±0.04 2.045±0.07 1.246±0.72 0.854±0.06 1.490±0.76
ENST00000368869 N/A N/A N/A N/A N/A 1.453±0.00 N/A N/A 2.008±0.00 1.112±0.00 2.868±0.00 3.584±0.00 1.825±0.00 3.779±0.00
ENST00000411816 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000496730 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENST00000541070 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSG00000225152 ENST00000415509 N/A N/A N/A N/A N/A N/A 0.040±0.00 N/A N/A N/A N/A N/A N/A 0.080±0.00
ENSG00000227586 ENST00000469206 0.110±0.00 0.057±0.00 N/A N/A 0.059±0.00 0.055±0.00 N/A N/A N/A 0.110±0.00 0.051±0.00 0.222±0.05 0.263±0.00 0.137±0.00
ENSG00000230131 ENST00000448347 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.072±0.00 0.093±0.00
ENST00000448671 N/A N/A N/A 0.119±0.00 0.169±0.00 0.180±0.00 0.052±0.00 0.221±0.00 0.025±0.00 0.685±0.00 0.124±0.00 N/A N/A 0.685±0.00
ENSG00000234542 ENST00000451295 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A 0.088±0.00
Gene Transcript Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUSG00000030861 ENSMUST00000015829 28.501±2.43 54.442±20.71 14.571±0.74 6.547±3.72 14.566±2.61 6.429±0.97 21.491±1.56 24.987±4.63 14.574±8.23 14.928±3.76 20.930±2.17 16.927±8.09 5.809±2.79 4.665±1.01
ENSMUST00000117518 N/A N/A N/A 2.686±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 1.395±0.00 0.493±0.00
ENSMUST00000133277 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000135633 N/A N/A N/A 18.426±0.00 N/A N/A N/A N/A N/A N/A N/A 64.455±0.00 17.825±5.69 11.601±0.00
ENSMUST00000136612 N/A N/A N/A 101.050±0.00 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000151995 N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A N/A
ENSMUST00000156261 N/A 22.278±4.91 N/A 3.536±0.00 9.079±3.32 N/A N/A 15.407±0.00 8.635±5.48 6.396±0.93 N/A 12.112±0.00 2.702±0.19 1.251±0.46
ENSMUSG00000040125 ENSMUST00000045840 0.009±0.00 0.006±0.00 0.005±0.00 6.581±3.29 0.012±0.02 0.014±0.01 0.002±0.00 0.004±0.00 0.004±0.00 0.006±0.00 0.004±0.00 0.015±0.00 0.008±0.01 0.012±0.01
ENSMUSG00000040148 ENSMUST00000046093 N/A N/A N/A 0.506±0.34 N/A 0.902±0.32 0.021±0.00 0.150±0.05 0.012±0.01 0.016±0.00 N/A N/A 0.046±0.05 0.027±0.01
ENSMUSG00000050100 ENSMUST00000051997 N/A N/A N/A 0.168±0.00 N/A N/A N/A N/A N/A N/A N/A N/A 0.083±0.00 N/A
ENSMUST00000183219 N/A N/A N/A 0.881±0.06 N/A 0.448±0.22 N/A 3.529±0.62 0.006±0.00 N/A N/A 0.073±0.00 0.016±0.01 N/A
ENSMUSG00000062758 ENSMUST00000085365 0.136±0.06 0.124±0.04 0.237±0.04 0.944±1.18 0.382±0.27 0.093±0.02 0.059±0.02 0.174±0.09 0.100±0.05 0.073±0.03 0.069±0.00 0.234±0.10 0.110±0.03 2.744±0.49
ENSMUSG00000066979 ENSMUST00000084502 36.989±6.78 44.633±0.78 13.140±1.91 30.796±20.56 35.316±5.21 33.210±3.57 19.589±0.95 30.086±1.51 25.139±19.29 44.272±2.78 11.801±0.94 49.360±14.45 21.775±10.22 18.581±8.82

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