C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: zgc:171759
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSDART00000050237 zgc:171759-201 ENSDARG00000034203 7955 + 25:36109721-36110168 protein_coding

Expression Patterns

No expression data.

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0000LM CIL_0000LM_0001 CGP 25:36109719-36111779

Gene Ontology

GO IDEvidence TypeGO Description
GO:0000786 IEA nucleosome
GO:0003677 IEA DNA binding
GO:0005622 IEA intracellular
GO:0005634 IEA nucleus
GO:0005694 IEA chromosome
GO:0006334 IEA nucleosome assembly
GO:0043565 IEA sequence-specific DNA binding
GO:0046982 IEA protein heterodimerization activity

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000018246 Hist1h2bc-001 protein_coding Mus_musculus 0 348
ENSMUST00000052776 Hist1h2ba-001 protein_coding Mus_musculus 0 315
ENSMUST00000091749 Hist1h2bq-201 protein_coding Mus_musculus 0 348
ENSMUST00000099703 Hist1h2bb-001 protein_coding Mus_musculus 0 335
ENSMUST00000110452 Hist1h2bj-001 protein_coding Mus_musculus 0 353
ENSMUST00000110467 Hist1h2br-001 protein_coding Mus_musculus 0 348
ENSMUST00000110469 Hist1h2bq-001 protein_coding Mus_musculus 0 348
ENSMUST00000177113 Hist2h2bb-001 protein_coding Mus_musculus 0 298
ENSMUST00000180288 Hist1h2br-201 protein_coding Mus_musculus 0 348
ENST00000289316 HIST1H2BD-001 protein_coding Homo_sapiens 0 309
ENST00000314332 HIST1H2BC-003 protein_coding Homo_sapiens 0 320
ENST00000369155 HIST2H2BE-001 protein_coding Homo_sapiens 0 353
ENST00000369160 HIST2H2BE-201 protein_coding Homo_sapiens 0 353
ENST00000369167 HIST2H2BF-001 protein_coding Homo_sapiens 0 315
ENST00000369385 HIST2H2BD-001 processed_pseudogene Homo_sapiens 0 331
ENST00000377401 HIST1H2BL-001 protein_coding Homo_sapiens 0 320
ENST00000377777 HIST1H2BD-002 protein_coding Homo_sapiens 0 309
ENST00000396984 HIST1H2BC-002 protein_coding Homo_sapiens 0 320
ENST00000412169 HIST2H2BA-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 292
ENST00000430394 HIST2H2BA-002 processed_transcript Homo_sapiens 0 292
ENST00000449108 HIST2H2BB-001 transcribed_unprocessed_pseudogene Homo_sapiens 0 292
ENST00000469483 HIST2H2BF-002 processed_transcript Homo_sapiens 0 315
ENST00000498492 HIST2H2BC-001 processed_pseudogene Homo_sapiens 0 331
ENST00000545683 HIST2H2BF-201 protein_coding Homo_sapiens 0 315
ENST00000609585 HIST2H2BB-002 processed_transcript Homo_sapiens 0 292
ENST00000614097 HIST1H2BE-001 protein_coding Homo_sapiens 0 320
ENST00000615966 HIST1H2BB-001 protein_coding Homo_sapiens 0 281
ENST00000616182 HIST1H2BO-001 protein_coding Homo_sapiens 0 348
ENST00000619466 HIST1H2BH-001 protein_coding Homo_sapiens 0 316

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