C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 10343
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000096279 Gm10343-201 ENSMUSG00000071671 10090 + 16:10801369-10801716 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000096279
Transcript ID Adipose Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000096279 0.267±0.08 0.137±0.00 0.352±0.13 0.452±0.00 0.412±0.22 0.183±0.00 0.176±0.09 0.230±0.00 0.700±0.28 0.932±0.36 0.469±0.30 5.275±1.76

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000287038 RPL30-001 protein_coding Homo_sapiens 0 492
ENST00000396070 RPL30-009 protein_coding Homo_sapiens 0 224
ENST00000414021 RPL30P2-001 processed_pseudogene Homo_sapiens 0 270
ENST00000419341 RPL30P16-001 processed_pseudogene Homo_sapiens 0 211
ENST00000429309 RPL30P4-001 processed_pseudogene Homo_sapiens 0 388
ENST00000457129 RPL30P15-001 processed_pseudogene Homo_sapiens 0 291
ENST00000479312 RPL30P7-001 processed_pseudogene Homo_sapiens 0 191
ENST00000480085 RP1-249H1.3-001 processed_pseudogene Homo_sapiens 0 337
ENST00000482744 RPL30P14-001 processed_pseudogene Homo_sapiens 0 425
ENST00000517489 RPL30-004 retained_intron Homo_sapiens 0 392
ENST00000518164 RPL30-002 processed_transcript Homo_sapiens 0 224
ENST00000518850 RPL30-010 nonsense_mediated_decay Homo_sapiens 0 270
ENST00000520998 RPL30-006 retained_intron Homo_sapiens 0 231
ENST00000521112 RPL30-005 retained_intron Homo_sapiens 0 200
ENST00000521291 RPL30-007 protein_coding Homo_sapiens 0 492
ENST00000521534 RPL30-013 retained_intron Homo_sapiens 0 272
ENST00000521726 RPL30-003 protein_coding Homo_sapiens 0 484
ENST00000523172 RPL30-008 protein_coding Homo_sapiens 0 270

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