C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 15661
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117390 Gm15661-001 ENSMUSG00000080748 10090 - 7:88448675-88449230 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; BrainLiverENSMUST00000117390
Transcript ID Brain Liver
ENSMUST00000117390 0.043±0.00 0.031±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_000541 CIL_000541_0002 CGP 7:88430273-89404222

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000391360 RP11-347C18.1-001 processed_pseudogene Homo_sapiens 0 446
ENST00000396131 RPL17P50-001 processed_pseudogene Homo_sapiens 0 414
ENST00000404330 RPL17P25-001 processed_pseudogene Homo_sapiens 0 453
ENST00000448403 RP11-383G10.3-001 processed_pseudogene Homo_sapiens 0 472
ENST00000461464 RPL17P20-001 processed_pseudogene Homo_sapiens 0 442
ENST00000467688 RPL17P22-001 processed_pseudogene Homo_sapiens 0 486
ENST00000485656 RP11-273P3.1-001 processed_pseudogene Homo_sapiens 0 261
ENST00000488371 RP11-864J10.2-001 processed_pseudogene Homo_sapiens 0 359
ENST00000498256 RPL17P33-001 processed_pseudogene Homo_sapiens 0 518
ENST00000524791 RP11-757C15.4-001 processed_pseudogene Homo_sapiens 0 246
ENST00000596405 CTD-2550O8.7-001 processed_pseudogene Homo_sapiens 0 387
ENST00000605218 RPL17P51-001 processed_pseudogene Homo_sapiens 4e-26 121

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