C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 13215
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000117559 Gm13215-001 ENSMUSG00000081394 10090 - 4:132148413-132148884 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBreastLiverOvaryPlacentaTestisENSMUST00000117559
Transcript ID Adipose Bladder Breast Liver Ovary Placenta Testis
ENSMUST00000117559 0.293±0.04 0.070±0.02 0.290±0.00 0.058±0.01 0.223±0.20 0.146±0.03 0.099±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00099N CIL_00099N_0002 VISTA 4:131775516-132379227

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000329806 RP11-558O12.1-001 processed_pseudogene Homo_sapiens 0 449
ENST00000402798 RP11-367G18.2-001 processed_pseudogene Homo_sapiens 0 549
ENST00000429552 RP4-814D15.2-001 processed_pseudogene Homo_sapiens 0 525
ENST00000447672 RP11-28P17.3-001 processed_pseudogene Homo_sapiens 0 414
ENST00000452665 RP11-423E7.1-001 processed_pseudogene Homo_sapiens 0 268
ENST00000453803 RPS27AP3-001 processed_pseudogene Homo_sapiens 0 492
ENST00000457576 RPS27AP2-001 processed_pseudogene Homo_sapiens 0 573
ENST00000463344 RP13-926M18.1-001 processed_pseudogene Homo_sapiens 0 392
ENST00000468810 RPS27A-010 retained_intron Homo_sapiens 8e-32 141
ENST00000475545 RPS27AP1-001 processed_pseudogene Homo_sapiens 0 536
ENST00000477681 CTD-2015H6.2-001 processed_pseudogene Homo_sapiens 0 418
ENST00000492222 RP11-51O6.1-001 transcribed_processed_pseudogene Homo_sapiens 0 662
ENST00000498403 RP11-1070A24.1-001 processed_pseudogene Homo_sapiens 0 263
ENST00000591758 RP11-51O6.1-002 processed_transcript Homo_sapiens 0 662
ENST00000597285 CTD-3214H19.12-001 processed_pseudogene Homo_sapiens 0 383

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