C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000329806 RP11-558O12.1-001 ENSG00000182888 9606 + X:3717149-3717600 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungOvaryTestisENST00000329806
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Ovary Testis
ENST00000329806 0.116±0.00 0.061±0.00 0.054±0.02 0.031±0.00 0.085±0.00 0.109±0.00 0.060±0.00 0.054±0.00 0.089±0.00 0.057±0.00 0.143±0.09

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000102844 Rps27a-004 protein_coding Mus_musculus 0 472
ENSMUST00000102845 Rps27a-003 protein_coding Mus_musculus 0 472
ENSMUST00000119780 Gm8430-001 processed_pseudogene Mus_musculus 0 466
ENSMUST00000078766 Rps27a-ps2-001 processed_pseudogene Mus_musculus 0 460
ENSMUST00000117559 Gm13215-001 processed_pseudogene Mus_musculus 0 449
ENSMUST00000121742 Gm11759-001 processed_pseudogene Mus_musculus 0 442
ENSMUST00000121261 Gm8317-001 processed_pseudogene Mus_musculus 0 427
ENSMUST00000119963 Gm13815-001 processed_pseudogene Mus_musculus 0 359
ENSMUST00000160015 Gm16139-001 processed_pseudogene Mus_musculus 0 350
ENSMUST00000120658 Gm13622-001 processed_pseudogene Mus_musculus 0 324
ENSMUST00000121696 Gm12882-001 processed_pseudogene Mus_musculus 0 287
ENSMUST00000191424 RP24-388H6.1-001 processed_pseudogene Mus_musculus 0 287
ENSMUST00000181136 Gm27018-001 processed_pseudogene Mus_musculus 0 248
ENSMUST00000147782 Rps27a-002 processed_transcript Mus_musculus 0 233
ENSMUST00000121502 Gm14101-001 processed_pseudogene Mus_musculus 0 219
ENSMUST00000117540 Gm13428-001 processed_pseudogene Mus_musculus 3e-39 165
ENSMUST00000120373 Gm13532-001 processed_pseudogene Mus_musculus 2e-36 156
ENSMUST00000150739 Rps27a-005 processed_transcript Mus_musculus 6e-27 124
ENSMUST00000143418 Rps27a-001 processed_transcript Mus_musculus 0.000000000000003 86

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