C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000477681 CTD-2015H6.2-001 ENSG00000242706 9606 - 5:80498534-80498971 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastKidneyLungMuscleTestisENST00000477681
Transcript ID Adipose Adrenal Breast Kidney Lung Muscle Testis
ENST00000477681 0.030±0.00 0.094±0.00 0.093±0.00 0.155±0.00 0.030±0.00 0.027±0.00 0.028±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000078766 Rps27a-ps2-001 processed_pseudogene Mus_musculus 0 429
ENSMUST00000102844 Rps27a-004 protein_coding Mus_musculus 0 429
ENSMUST00000102845 Rps27a-003 protein_coding Mus_musculus 0 429
ENSMUST00000119780 Gm8430-001 processed_pseudogene Mus_musculus 0 424
ENSMUST00000117559 Gm13215-001 processed_pseudogene Mus_musculus 0 418
ENSMUST00000121261 Gm8317-001 processed_pseudogene Mus_musculus 0 383
ENSMUST00000185489 RP23-125B4.3-001 processed_pseudogene Mus_musculus 0 363
ENSMUST00000150739 Rps27a-005 processed_transcript Mus_musculus 0 363
ENSMUST00000121742 Gm11759-001 processed_pseudogene Mus_musculus 0 353
ENSMUST00000119963 Gm13815-001 processed_pseudogene Mus_musculus 0 340
ENSMUST00000120658 Gm13622-001 processed_pseudogene Mus_musculus 0 327
ENSMUST00000191424 RP24-388H6.1-001 processed_pseudogene Mus_musculus 0 294
ENSMUST00000147782 Rps27a-002 processed_transcript Mus_musculus 0 292
ENSMUST00000121696 Gm12882-001 processed_pseudogene Mus_musculus 0 276
ENSMUST00000120373 Gm13532-001 processed_pseudogene Mus_musculus 0 193
ENSMUST00000121502 Gm14101-001 processed_pseudogene Mus_musculus 0 187

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