C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 13351
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000118087 Gm13351-001 ENSMUSG00000081619 10090 - 2:18179029-18179442 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdrenalBladderBrainBreastColonKidneyLiverMuscleOvaryPlacentaTestisENSMUST00000118087
Transcript ID Adrenal Bladder Brain Breast Colon Kidney Liver Muscle Ovary Placenta Testis
ENSMUST00000118087 0.254±0.02 1.281±0.00 0.703±0.59 1.023±0.62 0.401±0.11 1.082±0.00 0.560±0.22 0.169±0.02 0.755±0.35 0.773±0.54 1.373±0.55

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00096N CIL_00096N_0002 VISTA 2:17746233-18347055
CIL_000781 CIL_000781_0003 CGP 2:18040676-18212388
CIL_0007JW CIL_0007JW_0002 UCNEbase 2:18048722-18311061
CIL_000238 CIL_000238_0002 CGP 2:18055237-18392830

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000392524 HNRNPA3-001 protein_coding Homo_sapiens 0 394
ENST00000411529 HNRNPA3-002 protein_coding Homo_sapiens 0 394
ENST00000416838 HNRNPA3P3-001 processed_pseudogene Homo_sapiens 0 359
ENST00000424736 RP11-512F24.1-001 processed_pseudogene Homo_sapiens 0 375
ENST00000427514 HNRNPA3P4-001 processed_pseudogene Homo_sapiens 0 344
ENST00000435711 HNRNPA3-014 protein_coding Homo_sapiens 0 394
ENST00000437410 HNRNPA3P12-001 processed_pseudogene Homo_sapiens 0 318
ENST00000441511 AC012513.4-001 processed_pseudogene Homo_sapiens 2.99878e-43 180
ENST00000455201 HNRNPA3P5-001 processed_pseudogene Homo_sapiens 0 289
ENST00000472163 HNRNPA3P6-001 processed_pseudogene Homo_sapiens 0 394
ENST00000547726 HNRNPA3P10-001 processed_pseudogene Homo_sapiens 0 350

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