C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heterogeneous nuclear ribonucleoprotein A3 pseudogene 4
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000427514 HNRNPA3P4-001 ENSG00000226068 9606 - 6:48149203-48150005 processed_pseudogene

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonHeartLiverLungOvaryPlacentaTestisENST00000427514
Transcript ID Adipose Adrenal Brain Colon Heart Liver Lung Ovary Placenta Testis
ENST00000427514 0.013±0.00 0.067±0.00 0.027±0.00 0.012±0.00 0.013±0.00 0.012±0.00 0.013±0.00 0.013±0.00 0.019±0.00 0.130±0.11

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000090792 Hnrnpa3-201 protein_coding Mus_musculus 0 1005
ENSMUST00000111964 Hnrnpa3-002 protein_coding Mus_musculus 0 1005
ENSMUST00000117582 Gm5940-001 processed_pseudogene Mus_musculus 0 990
ENSMUST00000121942 Gm6161-001 processed_pseudogene Mus_musculus 0 987
ENSMUST00000091130 Gm5641-201 protein_coding Mus_musculus 0 987
ENSMUST00000177820 Gm9242-201 protein_coding Mus_musculus 0 987
ENSMUST00000164947 Hnrnpa3-202 protein_coding Mus_musculus 0 987
ENSMUST00000111962 Hnrnpa3-001 protein_coding Mus_musculus 0 987
ENSMUST00000120017 Gm12960-001 processed_pseudogene Mus_musculus 0 983
ENSMUST00000161973 Gm6397-001 processed_pseudogene Mus_musculus 0 965
ENSMUST00000168178 Gm6254-001 processed_pseudogene Mus_musculus 0 963
ENSMUST00000032395 Gm7399-001 processed_pseudogene Mus_musculus 0 952
ENSMUST00000119652 Gm11991-001 processed_pseudogene Mus_musculus 0 952
ENSMUST00000117287 Gm14398-001 processed_pseudogene Mus_musculus 0 931
ENSMUST00000111961 Hnrnpa3-003 protein_coding Mus_musculus 0 926
ENSMUST00000125165 Gm11847-001 processed_pseudogene Mus_musculus 0 909
ENSMUST00000071732 Gm6793-201 protein_coding Mus_musculus 0 893
ENSMUST00000172004 Gm6153-001 processed_pseudogene Mus_musculus 0 863
ENSMUST00000122378 Gm14730-001 processed_pseudogene Mus_musculus 0 856
ENSMUST00000166043 Gm17082-001 processed_pseudogene Mus_musculus 0 850
ENSMUST00000119643 Gm6758-001 processed_pseudogene Mus_musculus 0 841
ENSMUST00000073014 Gm8991-201 protein_coding Mus_musculus 0 841
ENSMUST00000119775 Gm6506-001 processed_pseudogene Mus_musculus 0 833
ENSMUST00000119765 Gm9431-001 processed_pseudogene Mus_musculus 0 811
ENSMUST00000191574 RP24-177N20.1-001 processed_pseudogene Mus_musculus 0 804
ENSMUST00000117756 Gm12194-001 processed_pseudogene Mus_musculus 0 797
ENSMUST00000120104 Gm12129-001 processed_pseudogene Mus_musculus 0 797
ENSMUST00000189662 RP23-472J11.2-001 processed_pseudogene Mus_musculus 0 765
ENSMUST00000121434 Gm14052-001 processed_pseudogene Mus_musculus 0 749
ENSMUST00000119037 Gm12986-001 processed_pseudogene Mus_musculus 0 706
ENSMUST00000184369 Gm17190-001 translated_processed_pseudogene Mus_musculus 0 704
ENSMUST00000119442 Gm13369-001 processed_pseudogene Mus_musculus 0 660
ENSMUST00000120507 Gm12961-001 processed_pseudogene Mus_musculus 0 628
ENSMUST00000185178 Gm17190-002 protein_coding Mus_musculus 0 608
ENSMUST00000089593 Gm7551-201 processed_pseudogene Mus_musculus 0 603
ENSMUST00000120487 Gm12229-001 processed_pseudogene Mus_musculus 0 553
ENSMUST00000132392 Hnrnpa3-005 retained_intron Mus_musculus 0 390
ENSMUST00000163579 Gm9064-001 processed_pseudogene Mus_musculus 0 385
ENSMUST00000118087 Gm13351-001 processed_pseudogene Mus_musculus 0 344
ENSMUST00000141974 Hnrnpa3-004 protein_coding Mus_musculus 0 320
ENSMUST00000117573 Gm15678-001 processed_pseudogene Mus_musculus 0 267

Loading