C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: heterogeneous nuclear ribonucleoprotein A3 pseudogene 12
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000437410 HNRNPA3P12-001 ENSG00000219102 9606 - 1:53974969-53976031 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENST00000437410
Transcript ID Adipose Adrenal Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENST00000437410 0.556±0.00 0.600±0.00 0.243±0.00 0.476±0.00 0.165±0.11 0.021±0.00 0.541±0.00 0.020±0.00 0.187±0.00 0.010±0.00 0.043±0.01 0.030±0.00 0.400±0.34

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000117582 Gm5940-001 processed_pseudogene Mus_musculus 0 1432
ENSMUST00000177820 Gm9242-201 protein_coding Mus_musculus 0 1432
ENSMUST00000121942 Gm6161-001 processed_pseudogene Mus_musculus 0 1426
ENSMUST00000091130 Gm5641-201 protein_coding Mus_musculus 0 1426
ENSMUST00000090792 Hnrnpa3-201 protein_coding Mus_musculus 0 1426
ENSMUST00000164947 Hnrnpa3-202 protein_coding Mus_musculus 0 1426
ENSMUST00000111962 Hnrnpa3-001 protein_coding Mus_musculus 0 1426
ENSMUST00000111964 Hnrnpa3-002 protein_coding Mus_musculus 0 1426
ENSMUST00000120017 Gm12960-001 processed_pseudogene Mus_musculus 0 1406
ENSMUST00000168178 Gm6254-001 processed_pseudogene Mus_musculus 0 1402
ENSMUST00000161973 Gm6397-001 processed_pseudogene Mus_musculus 0 1402
ENSMUST00000119652 Gm11991-001 processed_pseudogene Mus_musculus 0 1387
ENSMUST00000117287 Gm14398-001 processed_pseudogene Mus_musculus 0 1360
ENSMUST00000125165 Gm11847-001 processed_pseudogene Mus_musculus 0 1341
ENSMUST00000071732 Gm6793-201 protein_coding Mus_musculus 0 1321
ENSMUST00000119643 Gm6758-001 processed_pseudogene Mus_musculus 0 1266
ENSMUST00000172004 Gm6153-001 processed_pseudogene Mus_musculus 0 1264
ENSMUST00000122378 Gm14730-001 processed_pseudogene Mus_musculus 0 1247
ENSMUST00000119775 Gm6506-001 processed_pseudogene Mus_musculus 0 1201
ENSMUST00000120104 Gm12129-001 processed_pseudogene Mus_musculus 0 1186
ENSMUST00000119765 Gm9431-001 processed_pseudogene Mus_musculus 0 1179
ENSMUST00000032395 Gm7399-001 processed_pseudogene Mus_musculus 0 1127
ENSMUST00000089593 Gm7551-201 processed_pseudogene Mus_musculus 0 1072
ENSMUST00000191574 RP24-177N20.1-001 processed_pseudogene Mus_musculus 0 1029
ENSMUST00000166043 Gm17082-001 processed_pseudogene Mus_musculus 0 1013
ENSMUST00000120507 Gm12961-001 processed_pseudogene Mus_musculus 0 981
ENSMUST00000111961 Hnrnpa3-003 protein_coding Mus_musculus 0 907
ENSMUST00000185178 Gm17190-002 protein_coding Mus_musculus 0 880
ENSMUST00000073014 Gm8991-201 protein_coding Mus_musculus 0 846
ENSMUST00000184369 Gm17190-001 translated_processed_pseudogene Mus_musculus 0 819
ENSMUST00000141974 Hnrnpa3-004 protein_coding Mus_musculus 0 782
ENSMUST00000117756 Gm12194-001 processed_pseudogene Mus_musculus 0 754
ENSMUST00000121434 Gm14052-001 processed_pseudogene Mus_musculus 0 745
ENSMUST00000189662 RP23-472J11.2-001 processed_pseudogene Mus_musculus 0 730
ENSMUST00000119037 Gm12986-001 processed_pseudogene Mus_musculus 0 706
ENSMUST00000119442 Gm13369-001 processed_pseudogene Mus_musculus 0 667
ENSMUST00000120487 Gm12229-001 processed_pseudogene Mus_musculus 0 556
ENSMUST00000118087 Gm13351-001 processed_pseudogene Mus_musculus 0 318
ENSMUST00000117573 Gm15678-001 processed_pseudogene Mus_musculus 0 257
ENSMUST00000132392 Hnrnpa3-005 retained_intron Mus_musculus 1.00053e-42 178
ENSMUST00000167880 Sbf2-006 retained_intron Mus_musculus 0 296

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