C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000424736 RP11-512F24.1-001 ENSG00000232499 9606 + 1:113449700-113450728 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungOvaryPlacentaTestisENST00000424736
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Ovary Placenta Testis
ENST00000424736 0.022±0.00 0.091±0.00 0.110±0.00 0.242±0.00 0.078±0.00 0.082±0.06 0.096±0.00 0.227±0.00 0.035±0.00 0.506±0.46 0.343±0.26 0.112±0.01 0.087±0.01

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000125165 Gm11847-001 processed_pseudogene Mus_musculus 0 1487
ENSMUST00000071732 Gm6793-201 protein_coding Mus_musculus 0 1472
ENSMUST00000122378 Gm14730-001 processed_pseudogene Mus_musculus 0 1382
ENSMUST00000121434 Gm14052-001 processed_pseudogene Mus_musculus 0 1369
ENSMUST00000189662 RP23-472J11.2-001 processed_pseudogene Mus_musculus 0 1327
ENSMUST00000119765 Gm9431-001 processed_pseudogene Mus_musculus 0 1315
ENSMUST00000119643 Gm6758-001 processed_pseudogene Mus_musculus 0 1295
ENSMUST00000117756 Gm12194-001 processed_pseudogene Mus_musculus 0 1247
ENSMUST00000117287 Gm14398-001 processed_pseudogene Mus_musculus 0 1219
ENSMUST00000119442 Gm13369-001 processed_pseudogene Mus_musculus 0 1212
ENSMUST00000166043 Gm17082-001 processed_pseudogene Mus_musculus 0 1168
ENSMUST00000120507 Gm12961-001 processed_pseudogene Mus_musculus 0 1031
ENSMUST00000185178 Gm17190-002 protein_coding Mus_musculus 0 1013
ENSMUST00000177820 Gm9242-201 protein_coding Mus_musculus 0 998
ENSMUST00000117582 Gm5940-001 processed_pseudogene Mus_musculus 0 992
ENSMUST00000121942 Gm6161-001 processed_pseudogene Mus_musculus 0 992
ENSMUST00000091130 Gm5641-201 protein_coding Mus_musculus 0 992
ENSMUST00000164947 Hnrnpa3-202 protein_coding Mus_musculus 0 992
ENSMUST00000111962 Hnrnpa3-001 protein_coding Mus_musculus 0 992
ENSMUST00000090792 Hnrnpa3-201 protein_coding Mus_musculus 0 989
ENSMUST00000111961 Hnrnpa3-003 protein_coding Mus_musculus 0 989
ENSMUST00000111964 Hnrnpa3-002 protein_coding Mus_musculus 0 989
ENSMUST00000120017 Gm12960-001 processed_pseudogene Mus_musculus 0 987
ENSMUST00000161973 Gm6397-001 processed_pseudogene Mus_musculus 0 987
ENSMUST00000168178 Gm6254-001 processed_pseudogene Mus_musculus 0 974
ENSMUST00000119652 Gm11991-001 processed_pseudogene Mus_musculus 0 963
ENSMUST00000032395 Gm7399-001 processed_pseudogene Mus_musculus 0 959
ENSMUST00000184369 Gm17190-001 translated_processed_pseudogene Mus_musculus 0 944
ENSMUST00000073014 Gm8991-201 protein_coding Mus_musculus 0 931
ENSMUST00000089593 Gm7551-201 processed_pseudogene Mus_musculus 0 924
ENSMUST00000120104 Gm12129-001 processed_pseudogene Mus_musculus 0 889
ENSMUST00000172004 Gm6153-001 processed_pseudogene Mus_musculus 0 848
ENSMUST00000119775 Gm6506-001 processed_pseudogene Mus_musculus 0 832
ENSMUST00000191574 RP24-177N20.1-001 processed_pseudogene Mus_musculus 0 821
ENSMUST00000119037 Gm12986-001 processed_pseudogene Mus_musculus 0 817
ENSMUST00000120487 Gm12229-001 processed_pseudogene Mus_musculus 0 603
ENSMUST00000141974 Hnrnpa3-004 protein_coding Mus_musculus 0 601
ENSMUST00000117573 Gm15678-001 processed_pseudogene Mus_musculus 0 584
ENSMUST00000121177 Gm5383-001 processed_pseudogene Mus_musculus 0 534
ENSMUST00000163579 Gm9064-001 processed_pseudogene Mus_musculus 0 455
ENSMUST00000132392 Hnrnpa3-005 retained_intron Mus_musculus 0 403
ENSMUST00000167880 Sbf2-006 retained_intron Mus_musculus 0 377
ENSMUST00000118087 Gm13351-001 processed_pseudogene Mus_musculus 0 375

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