C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 13213
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000119668 Gm13213-001 ENSMUSG00000083885 10090 - 4:133638210-133638683 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000119668
Transcript ID Adipose Bladder Brain Breast Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000119668 0.258±0.06 0.236±0.11 0.059±0.01 0.262±0.14 0.162±0.09 0.252±0.05 0.064±0.03 0.125±0.01 0.130±0.00 0.705±0.16 0.108±0.00 0.153±0.05

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0007T4 CIL_0007T4_0002 VISTA 4:133429051-134030305

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000294189 RPL29-001 protein_coding Homo_sapiens 0 327
ENST00000413677 RP4-595K12.1-001 processed_pseudogene Homo_sapiens 0 287
ENST00000440227 RPL29P7-001 processed_pseudogene Homo_sapiens 0 279
ENST00000442089 RP5-1057J7.1-001 processed_pseudogene Homo_sapiens 0 281
ENST00000443998 RP11-632C17__A.1-001 processed_pseudogene Homo_sapiens 0 315
ENST00000446953 RP1-130G2.1-001 processed_pseudogene Homo_sapiens 0 254
ENST00000451924 RP11-42D20.1-001 processed_pseudogene Homo_sapiens 0 300
ENST00000463466 RP11-874G11.1-001 processed_pseudogene Homo_sapiens 0 215
ENST00000465434 RPL29P24-001 processed_pseudogene Homo_sapiens 0 285
ENST00000466397 RPL29-005 protein_coding Homo_sapiens 0 327
ENST00000475248 RPL29-008 protein_coding Homo_sapiens 0 327
ENST00000478358 RP11-490G8.1-001 processed_pseudogene Homo_sapiens 0 327
ENST00000479017 RPL29-009 protein_coding Homo_sapiens 0 327
ENST00000480306 RPL29-004 nonsense_mediated_decay Homo_sapiens 3e-36 156
ENST00000481629 RPL29-003 protein_coding Homo_sapiens 3e-37 159
ENST00000482584 RP11-342F17.1-001 processed_pseudogene Homo_sapiens 0 259
ENST00000486188 RPL29P23-001 processed_pseudogene Homo_sapiens 0 207
ENST00000486565 RPL29-002 retained_intron Homo_sapiens 0.0000000004 69
ENST00000486611 RPL29P3-001 processed_pseudogene Homo_sapiens 0 248
ENST00000492277 RPL29-007 protein_coding Homo_sapiens 0 327
ENST00000494408 RPL29P11-001 processed_pseudogene Homo_sapiens 0 316
ENST00000495383 RPL29-006 protein_coding Homo_sapiens 0 327
ENST00000496042 RP11-452G18.1-001 processed_pseudogene Homo_sapiens 0 200

Loading