C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12109
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121140 Gm12109-001 ENSMUSG00000081613 10090 + 11:32185005-32185701 processed_pseudogene

Mus musculus EnsemblGRCm38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeBladderBrainBreastLiverLungOvaryTestisENSMUST00000121140
Transcript ID Adipose Bladder Brain Breast Liver Lung Ovary Testis
ENSMUST00000121140 0.052±0.00 0.008±0.01 0.086±0.04 0.082±0.00 0.021±0.03 0.122±0.08 0.087±0.00 0.054±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00094P CIL_00094P_0002 VISTA 11:31945270-32546411
CIL_0008HK CIL_0008HK_0002 VISTA 11:31950452-32552344

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000393351 RP5-1106E3.1-001 processed_pseudogene Homo_sapiens 0 616
ENST00000428058 CTD-2666L21.2-001 processed_pseudogene Homo_sapiens 0 665
ENST00000434010 RPS2P1-001 processed_pseudogene Homo_sapiens 0 617
ENST00000436136 RP11-16L9.1-001 processed_pseudogene Homo_sapiens 0 560
ENST00000447422 RP11-109P14.8-001 processed_pseudogene Homo_sapiens 0 479
ENST00000479476 RPS2P6-001 processed_pseudogene Homo_sapiens 0 606
ENST00000480705 RP11-296A18.5-001 processed_pseudogene Homo_sapiens 0 691
ENST00000488906 RP5-867C24.1-001 processed_pseudogene Homo_sapiens 0 597
ENST00000491725 RP11-810P12.1-001 processed_pseudogene Homo_sapiens 0 523
ENST00000492365 KB-1683C8.1-001 processed_pseudogene Homo_sapiens 0 628
ENST00000498401 RP11-270M14.1-001 transcribed_processed_pseudogene Homo_sapiens 0 230
ENST00000612648 CTB-75G16.1-001 processed_pseudogene Homo_sapiens 0 606

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