C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000428058 CTD-2666L21.2-001 ENSG00000234750 9606 + 19:12284337-12285185 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonKidneyLiverLungMuscleOvaryTestisENST00000428058
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Kidney Liver Lung Muscle Ovary Testis
ENST00000428058 0.299±0.00 0.672±0.00 0.466±0.00 0.305±0.10 0.714±0.07 0.609±0.49 0.295±0.20 0.168±0.04 0.672±0.00 0.993±0.67 0.184±0.11 0.275±0.11

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000117071 Gm11249-001 processed_pseudogene Mus_musculus 0 828
ENSMUST00000170335 Rps2-ps10-002 processed_transcript Mus_musculus 0 806
ENSMUST00000117295 Rps2-ps13-001 processed_pseudogene Mus_musculus 0 806
ENSMUST00000170715 Rps2-201 protein_coding Mus_musculus 0 806
ENSMUST00000054289 Rps2-001 protein_coding Mus_musculus 0 806
ENSMUST00000076842 Rps2-ps10-001 transcribed_processed_pseudogene Mus_musculus 0 802
ENSMUST00000079261 Gm6139-001 processed_pseudogene Mus_musculus 0 795
ENSMUST00000085368 Gm5786-201 protein_coding Mus_musculus 0 789
ENSMUST00000186517 RP23-128A11.3-001 processed_pseudogene Mus_musculus 0 776
ENSMUST00000132939 Gm9013-001 processed_pseudogene Mus_musculus 0 773
ENSMUST00000121713 Gm10420-001 processed_pseudogene Mus_musculus 0 767
ENSMUST00000118720 Gm11599-001 processed_pseudogene Mus_musculus 0 763
ENSMUST00000177599 Gm5070-001 processed_pseudogene Mus_musculus 0 763
ENSMUST00000169678 Gm6576-201 protein_coding Mus_musculus 0 761
ENSMUST00000184266 Rps2-ps5-001 processed_pseudogene Mus_musculus 0 760
ENSMUST00000120203 Gm12933-001 processed_pseudogene Mus_musculus 0 756
ENSMUST00000121722 Gm12366-001 processed_pseudogene Mus_musculus 0 754
ENSMUST00000146867 Rps2-002 protein_coding Mus_musculus 0 752
ENSMUST00000071458 Gm4968-001 processed_pseudogene Mus_musculus 0 743
ENSMUST00000095471 Rps2-ps6-201 protein_coding Mus_musculus 0 743
ENSMUST00000166546 Gm18025-201 protein_coding Mus_musculus 0 743
ENSMUST00000073790 Gm6311-201 pseudogene Mus_musculus 0 725
ENSMUST00000119653 Gm16148-001 processed_pseudogene Mus_musculus 0 715
ENSMUST00000118634 Gm6433-001 processed_pseudogene Mus_musculus 0 712
ENSMUST00000121140 Gm12109-001 processed_pseudogene Mus_musculus 0 665
ENSMUST00000139570 Gm10653-001 transcribed_processed_pseudogene Mus_musculus 0 651
ENSMUST00000156423 Gm10653-003 processed_transcript Mus_musculus 0 651
ENSMUST00000132250 Gm10653-002 processed_transcript Mus_musculus 0 651
ENSMUST00000119247 Gm15653-001 processed_pseudogene Mus_musculus 0 630
ENSMUST00000122167 Gm16061-001 processed_pseudogene Mus_musculus 0 628
ENSMUST00000120626 Gm12922-001 processed_pseudogene Mus_musculus 0 625
ENSMUST00000120476 Gm13559-001 processed_pseudogene Mus_musculus 0 603
ENSMUST00000121348 Gm7638-001 processed_pseudogene Mus_musculus 0 499
ENSMUST00000117941 Gm14276-001 processed_pseudogene Mus_musculus 0 429
ENSMUST00000188013 RP24-467J24.1-001 processed_pseudogene Mus_musculus 0 335
ENSMUST00000122465 Gm12152-001 processed_pseudogene Mus_musculus 0 326
ENSMUST00000121316 Gm15820-001 processed_pseudogene Mus_musculus 0 285
ENSMUST00000132803 Rps2-006 retained_intron Mus_musculus 0 220
ENSMUST00000159341 Gm16138-001 processed_pseudogene Mus_musculus 0 202

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