C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: ribosomal protein S2 pseudogene 1
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000434010 RPS2P1-001 ENSG00000225246 9606 + 20:34122470-34123290 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainBreastColonKidneyLiverMuscleOvaryTestisENST00000434010
Transcript ID Adipose Adrenal Brain Breast Colon Kidney Liver Muscle Ovary Testis
ENST00000434010 0.173±0.00 0.031±0.00 0.036±0.00 0.091±0.01 0.031±0.00 0.033±0.00 0.028±0.00 0.159±0.00 0.153±0.01 0.428±0.37

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00098F CIL_00098F_0001 VISTA 20:33968769-34569610

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000076842 Rps2-ps10-001 transcribed_processed_pseudogene Mus_musculus 0 797
ENSMUST00000170335 Rps2-ps10-002 processed_transcript Mus_musculus 0 797
ENSMUST00000117295 Rps2-ps13-001 processed_pseudogene Mus_musculus 0 797
ENSMUST00000079261 Gm6139-001 processed_pseudogene Mus_musculus 0 785
ENSMUST00000170715 Rps2-201 protein_coding Mus_musculus 0 785
ENSMUST00000054289 Rps2-001 protein_coding Mus_musculus 0 785
ENSMUST00000132939 Gm9013-001 processed_pseudogene Mus_musculus 0 756
ENSMUST00000085368 Gm5786-201 protein_coding Mus_musculus 0 752
ENSMUST00000121713 Gm10420-001 processed_pseudogene Mus_musculus 0 741
ENSMUST00000121722 Gm12366-001 processed_pseudogene Mus_musculus 0 739
ENSMUST00000169678 Gm6576-201 protein_coding Mus_musculus 0 739
ENSMUST00000117071 Gm11249-001 processed_pseudogene Mus_musculus 0 737
ENSMUST00000118720 Gm11599-001 processed_pseudogene Mus_musculus 0 734
ENSMUST00000146867 Rps2-002 protein_coding Mus_musculus 0 732
ENSMUST00000186517 RP23-128A11.3-001 processed_pseudogene Mus_musculus 0 723
ENSMUST00000177599 Gm5070-001 processed_pseudogene Mus_musculus 0 723
ENSMUST00000120203 Gm12933-001 processed_pseudogene Mus_musculus 0 719
ENSMUST00000118634 Gm6433-001 processed_pseudogene Mus_musculus 0 713
ENSMUST00000071458 Gm4968-001 processed_pseudogene Mus_musculus 0 704
ENSMUST00000166546 Gm18025-201 protein_coding Mus_musculus 0 704
ENSMUST00000119653 Gm16148-001 processed_pseudogene Mus_musculus 0 691
ENSMUST00000095471 Rps2-ps6-201 protein_coding Mus_musculus 0 689
ENSMUST00000073790 Gm6311-201 pseudogene Mus_musculus 0 688
ENSMUST00000184266 Rps2-ps5-001 processed_pseudogene Mus_musculus 0 684
ENSMUST00000121190 Gm7860-001 processed_pseudogene Mus_musculus 0 682
ENSMUST00000139570 Gm10653-001 transcribed_processed_pseudogene Mus_musculus 0 623
ENSMUST00000156423 Gm10653-003 processed_transcript Mus_musculus 0 623
ENSMUST00000132250 Gm10653-002 processed_transcript Mus_musculus 0 623
ENSMUST00000120626 Gm12922-001 processed_pseudogene Mus_musculus 0 621
ENSMUST00000121140 Gm12109-001 processed_pseudogene Mus_musculus 0 617
ENSMUST00000119247 Gm15653-001 processed_pseudogene Mus_musculus 0 597
ENSMUST00000122167 Gm16061-001 processed_pseudogene Mus_musculus 0 595
ENSMUST00000120476 Gm13559-001 processed_pseudogene Mus_musculus 0 544
ENSMUST00000121348 Gm7638-001 processed_pseudogene Mus_musculus 0 475
ENSMUST00000117941 Gm14276-001 processed_pseudogene Mus_musculus 0 424
ENSMUST00000116032 Gm16073-001 processed_pseudogene Mus_musculus 0 396
ENSMUST00000119539 Gm14234-001 processed_pseudogene Mus_musculus 0 368
ENSMUST00000188013 RP24-467J24.1-001 processed_pseudogene Mus_musculus 0 337
ENSMUST00000159341 Gm16138-001 processed_pseudogene Mus_musculus 0 200
ENSMUST00000132803 Rps2-006 retained_intron Mus_musculus 0 198

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