C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description:
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000436136 RP11-16L9.1-001 ENSG00000227747 9606 + 1:198949016-198949805 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBreastColonLiverENST00000436136
Transcript ID Adipose Adrenal Breast Colon Liver
ENST00000436136 0.028±0.00 0.030±0.00 0.065±0.00 0.059±0.00 0.027±0.00

Conserved Regions

Gene is not located within a conserved region.

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000095471 Rps2-ps6-201 protein_coding Mus_musculus 0 658
ENSMUST00000170715 Rps2-201 protein_coding Mus_musculus 0 652
ENSMUST00000054289 Rps2-001 protein_coding Mus_musculus 0 652
ENSMUST00000170335 Rps2-ps10-002 processed_transcript Mus_musculus 0 647
ENSMUST00000117295 Rps2-ps13-001 processed_pseudogene Mus_musculus 0 647
ENSMUST00000079261 Gm6139-001 processed_pseudogene Mus_musculus 0 647
ENSMUST00000073790 Gm6311-201 pseudogene Mus_musculus 0 645
ENSMUST00000076842 Rps2-ps10-001 transcribed_processed_pseudogene Mus_musculus 0 643
ENSMUST00000117071 Gm11249-001 processed_pseudogene Mus_musculus 0 643
ENSMUST00000184266 Rps2-ps5-001 processed_pseudogene Mus_musculus 0 641
ENSMUST00000085368 Gm5786-201 protein_coding Mus_musculus 0 641
ENSMUST00000118911 Gm11687-001 processed_pseudogene Mus_musculus 0 630
ENSMUST00000132939 Gm9013-001 processed_pseudogene Mus_musculus 0 630
ENSMUST00000186517 RP23-128A11.3-001 processed_pseudogene Mus_musculus 0 628
ENSMUST00000120203 Gm12933-001 processed_pseudogene Mus_musculus 0 619
ENSMUST00000118720 Gm11599-001 processed_pseudogene Mus_musculus 0 616
ENSMUST00000177599 Gm5070-001 processed_pseudogene Mus_musculus 0 616
ENSMUST00000121713 Gm10420-001 processed_pseudogene Mus_musculus 0 614
ENSMUST00000166546 Gm18025-201 protein_coding Mus_musculus 0 614
ENSMUST00000169678 Gm6576-201 protein_coding Mus_musculus 0 608
ENSMUST00000121722 Gm12366-001 processed_pseudogene Mus_musculus 0 606
ENSMUST00000146867 Rps2-002 protein_coding Mus_musculus 0 599
ENSMUST00000071458 Gm4968-001 processed_pseudogene Mus_musculus 0 592
ENSMUST00000121190 Gm7860-001 processed_pseudogene Mus_musculus 0 586
ENSMUST00000119653 Gm16148-001 processed_pseudogene Mus_musculus 0 586
ENSMUST00000120626 Gm12922-001 processed_pseudogene Mus_musculus 0 568
ENSMUST00000146791 Gm12091-001 processed_pseudogene Mus_musculus 0 568
ENSMUST00000169235 Gm7502-001 processed_pseudogene Mus_musculus 0 562
ENSMUST00000121140 Gm12109-001 processed_pseudogene Mus_musculus 0 560
ENSMUST00000152407 Rps2-003 protein_coding Mus_musculus 0 560
ENSMUST00000118634 Gm6433-001 processed_pseudogene Mus_musculus 0 558
ENSMUST00000121420 Gm12176-001 processed_pseudogene Mus_musculus 0 549
ENSMUST00000121414 Rps2-ps9-001 processed_pseudogene Mus_musculus 0 545
ENSMUST00000119871 Gm12733-001 processed_pseudogene Mus_musculus 0 525
ENSMUST00000129580 Rps2-005 retained_intron Mus_musculus 0 523
ENSMUST00000122167 Gm16061-001 processed_pseudogene Mus_musculus 0 505
ENSMUST00000139570 Gm10653-001 transcribed_processed_pseudogene Mus_musculus 0 488
ENSMUST00000156423 Gm10653-003 processed_transcript Mus_musculus 0 488
ENSMUST00000132250 Gm10653-002 processed_transcript Mus_musculus 0 488
ENSMUST00000120476 Gm13559-001 processed_pseudogene Mus_musculus 0 486
ENSMUST00000119578 Gm11643-001 processed_pseudogene Mus_musculus 0 483
ENSMUST00000119247 Gm15653-001 processed_pseudogene Mus_musculus 0 483
ENSMUST00000121348 Gm7638-001 processed_pseudogene Mus_musculus 0 460
ENSMUST00000122809 Rps2-004 retained_intron Mus_musculus 0 459
ENSMUST00000159783 Gm8194-001 processed_pseudogene Mus_musculus 0 457
ENSMUST00000161130 Gm9550-001 processed_pseudogene Mus_musculus 0 448
ENSMUST00000116032 Gm16073-001 processed_pseudogene Mus_musculus 0 374
ENSMUST00000129984 Rps2-007 retained_intron Mus_musculus 0 350
ENSMUST00000117941 Gm14276-001 processed_pseudogene Mus_musculus 0 335
ENSMUST00000188013 RP24-467J24.1-001 processed_pseudogene Mus_musculus 0 309
ENSMUST00000116022 Gm15846-001 processed_pseudogene Mus_musculus 0 302
ENSMUST00000119539 Gm14234-001 processed_pseudogene Mus_musculus 0 298
ENSMUST00000118606 Gm3943-001 processed_pseudogene Mus_musculus 0 279
ENSMUST00000122465 Gm12152-001 processed_pseudogene Mus_musculus 0 254
ENSMUST00000132803 Rps2-006 retained_intron Mus_musculus 0 202
ENSMUST00000159341 Gm16138-001 processed_pseudogene Mus_musculus 4.00001e-41 172

Loading