C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: predicted gene 12403
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENSMUST00000121384 Gm12403-001 ENSMUSG00000082186 10090 + 4:41168646-41169604 processed_pseudogene

Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBladderBrainBreastColonHeartKidneyLiverLungMuscleOvaryPlacentaTestisENSMUST00000121384
Transcript ID Adipose Adrenal Bladder Brain Breast Colon Heart Kidney Liver Lung Muscle Ovary Placenta Testis
ENSMUST00000121384 0.541±0.18 0.162±0.09 0.260±0.04 0.489±0.25 0.345±0.09 0.182±0.11 0.209±0.13 0.261±0.14 0.348±0.14 0.292±0.14 0.075±0.03 0.387±0.20 0.239±0.14 4.508±2.73

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_0006AS CIL_0006AS_0002 CGP 4:41135743-41275144

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENST00000229239 GAPDH-001 protein_coding Homo_sapiens 0 898
ENST00000396856 GAPDH-004 protein_coding Homo_sapiens 0 771
ENST00000396858 GAPDH-008 protein_coding Homo_sapiens 0 896
ENST00000396859 GAPDH-003 protein_coding Homo_sapiens 0 898
ENST00000396861 GAPDH-002 protein_coding Homo_sapiens 0 898
ENST00000402643 GAPDHP72-001 processed_pseudogene Homo_sapiens 0 645
ENST00000403475 RP11-378G13.2-001 processed_pseudogene Homo_sapiens 0 608
ENST00000405405 GAPDHP63-001 processed_pseudogene Homo_sapiens 0 749
ENST00000419696 GAPDHP64-001 processed_pseudogene Homo_sapiens 0 671
ENST00000422905 GAPDHP67-001 processed_pseudogene Homo_sapiens 4e-36 156
ENST00000423136 GAPDHP55-001 processed_pseudogene Homo_sapiens 0 398
ENST00000423411 GAPDHP73-001 processed_pseudogene Homo_sapiens 0 649
ENST00000424043 GAPDHP46-001 processed_pseudogene Homo_sapiens 0 592
ENST00000425487 GAPDHP65-001 processed_pseudogene Homo_sapiens 0 793
ENST00000425504 GAPDHP69-001 processed_pseudogene Homo_sapiens 0 627
ENST00000426454 GAPDHP51-001 processed_pseudogene Homo_sapiens 0 206
ENST00000429913 GAPDHP29-001 processed_pseudogene Homo_sapiens 0 499
ENST00000432206 GAPDHP2-001 processed_pseudogene Homo_sapiens 0 590
ENST00000436626 GAPDHP48-001 processed_pseudogene Homo_sapiens 0 399
ENST00000436818 GAPDHP26-001 processed_pseudogene Homo_sapiens 0 529
ENST00000438477 GAPDHP58-001 processed_pseudogene Homo_sapiens 0 586
ENST00000442317 GAPDHP37-001 processed_pseudogene Homo_sapiens 0 398
ENST00000444107 GAPDHP20-001 processed_pseudogene Homo_sapiens 0 448
ENST00000444823 GAPDHP23-001 processed_pseudogene Homo_sapiens 0 436
ENST00000447427 GAPDHP27-001 processed_pseudogene Homo_sapiens 3e-33 147
ENST00000450301 GAPDHP21-001 processed_pseudogene Homo_sapiens 0 575
ENST00000452570 GAPDHP1-001 processed_pseudogene Homo_sapiens 0 848
ENST00000455134 GAPDHP28-001 processed_pseudogene Homo_sapiens 0 569
ENST00000466525 GAPDH-007 retained_intron Homo_sapiens 0 556
ENST00000466588 GAPDH-005 retained_intron Homo_sapiens 0 771
ENST00000474249 GAPDH-006 retained_intron Homo_sapiens 0 771
ENST00000481866 GAPDHP39-001 processed_pseudogene Homo_sapiens 0 411
ENST00000492719 GAPDH-011 retained_intron Homo_sapiens 0 584
ENST00000503632 GAPDHP38-001 processed_pseudogene Homo_sapiens 0 693
ENST00000507324 GAPDHP61-001 processed_pseudogene Homo_sapiens 0 702
ENST00000509325 GAPDHP31-001 processed_pseudogene Homo_sapiens 1e-36 158
ENST00000512110 AC007016.3-001 processed_pseudogene Homo_sapiens 0 267
ENST00000512278 GAPDHP76-001 unprocessed_pseudogene Homo_sapiens 2e-35 154
ENST00000513513 GAPDHP44-001 processed_pseudogene Homo_sapiens 0 697
ENST00000513846 GAPDHP60-001 processed_pseudogene Homo_sapiens 0 717
ENST00000513953 RP11-44N17.1-001 processed_pseudogene Homo_sapiens 0 414
ENST00000515313 GAPDHP62-001 processed_pseudogene Homo_sapiens 0 508
ENST00000520713 ANKRD46-009 processed_transcript Homo_sapiens 0 508
ENST00000524319 ANKRD46-003 processed_transcript Homo_sapiens 0 508
ENST00000613707 RP11-343D24.1-001 processed_pseudogene Homo_sapiens 0 501
ENST00000619601 GAPDH-201 protein_coding Homo_sapiens 0 826

Loading