C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 15
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000474031 KRT15-008 ENSG00000171346 9606 - 17:41513746-41521774 retained_intron

Homo sapiens EnsemblGRCh38

Genome
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Genes
Structures from Ensembl
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Transcripts
Structures from Ensembl
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Expression Patterns

Heat Map
Numeric Values
Transcript'; AdiposeAdrenalBrainColonHeartKidneyLiverMuscleOvaryPlacentaENST00000474031
Transcript ID Adipose Adrenal Brain Colon Heart Kidney Liver Muscle Ovary Placenta
ENST00000474031 0.192±0.00 0.166±0.00 0.060±0.00 0.026±0.01 0.021±0.00 0.293±0.00 0.020±0.00 0.006±0.00 0.797±0.66 0.104±0.04

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056U CIL_00056U_000I CGP 17:41500981-41522529
CIL_00056U CIL_00056U_000G CGP 17:41513743-41528308

Gene Ontology

GO IDEvidence TypeGO Description
No GO terms available.

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000107411 Krt15-001 protein_coding Mus_musculus 0 828
ENSMUST00000148502 Krt15-002 retained_intron Mus_musculus 0 774
ENSMUST00000007275 Krt13-001 protein_coding Mus_musculus 0 645
ENSMUST00000080893 Krt17-001 protein_coding Mus_musculus 0 507
ENSMUST00000007272 Krt14-001 protein_coding Mus_musculus 0 453
ENSMUST00000137265 Krt14-002 processed_transcript Mus_musculus 0 453
ENSMUST00000017270 Krt42-001 protein_coding Mus_musculus 0 435
ENSMUST00000126460 Krt19-002 processed_transcript Mus_musculus 0 361
ENSMUST00000007317 Krt19-001 protein_coding Mus_musculus 0 361
ENSMUST00000007280 Krt16-001 protein_coding Mus_musculus 0 337
ENSMUST00000128934 Krt13-002 processed_transcript Mus_musculus 0 322
ENSMUST00000121423 Gm11597-001 unprocessed_pseudogene Mus_musculus 0 302
ENSMUST00000107406 Krt42-002 retained_intron Mus_musculus 0 298
ENSMUST00000017741 Krt12-001 protein_coding Mus_musculus 6.02558e-44 183

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