C-It-Loci: A knowledge database for tissue-enriched loci.

Institute of Cardiovascular Regeneration, Goethe-University Frankfurt am Main

Transcript Info
Description: keratin 15
Transcript Accession Transcript Name Contained in Gene Tax ID Strand Position Biotype
ENST00000458290 KRT15-006 ENSG00000171346 9606 - 17:41515562-41522529 protein_coding

Homo sapiens EnsemblGRCh38

Genome
Exciting message
Genes
Structures from Ensembl
Connecting
Transcripts
Structures from Ensembl
Connecting
Powered by Dalliance 0.11.11

Expression Patterns

Heat Map
Numeric Values
Transcript'; LungOvaryPlacentaENST00000458290
Transcript ID Lung Ovary Placenta
ENST00000458290 3.379±2.64 24.476±27.73 0.521±0.00

Conserved Regions

Region IDSub-RegionRegion TypePosition
CIL_00056U CIL_00056U_000I CGP 17:41500981-41522529
CIL_00056U CIL_00056U_000G CGP 17:41513743-41528308

Gene Ontology

GO IDEvidence TypeGO Description
GO:0005198 IEA structural molecule activity
GO:0005882 IEA intermediate filament

Homologs

ENSEMBL Accession Gene Name Biotype Species E-Value Bit Score
ENSMUST00000148502 Krt15-002 retained_intron Mus_musculus 0 717
ENSMUST00000107411 Krt15-001 protein_coding Mus_musculus 0 710
ENSMUST00000007275 Krt13-001 protein_coding Mus_musculus 0 538
ENSMUST00000080893 Krt17-001 protein_coding Mus_musculus 0 418
ENSMUST00000007272 Krt14-001 protein_coding Mus_musculus 0 375
ENSMUST00000137265 Krt14-002 processed_transcript Mus_musculus 0 375
ENSMUST00000017270 Krt42-001 protein_coding Mus_musculus 0 372
ENSMUST00000128934 Krt13-002 processed_transcript Mus_musculus 0 322
ENSMUST00000007280 Krt16-001 protein_coding Mus_musculus 0 281
ENSMUST00000126460 Krt19-002 processed_transcript Mus_musculus 0 278
ENSMUST00000007317 Krt19-001 protein_coding Mus_musculus 0 278
ENSMUST00000121423 Gm11597-001 unprocessed_pseudogene Mus_musculus 0 261
ENSMUST00000107406 Krt42-002 retained_intron Mus_musculus 0 235
ENSMUST00000017741 Krt12-001 protein_coding Mus_musculus 1.96182e-44 183

Loading